明视野 HER2 原位杂交图像分析:临床应用验证。

IF 3.4 3区 医学 Q1 PATHOLOGY
Ruoyu Shi, João Correia Pinto, Ivan Rienda, Peter Caie, Catarina Eloy, António Polónia
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引用次数: 0

摘要

本研究旨在开发并验证一种定量图像分析(IA)算法,以帮助病理学家评估实体瘤的明视野 HER2 原位杂交(ISH)检测结果。我们用明视野 ISH 评估了 80 例连续病例(40 例 HER2 阴性,40 例 HER2 阳性)的 HER2 基因扩增情况。我们利用 HALO 软件的 ISH 模块开发了一种 IA 算法,可自动量化每个细胞的 HER2 和 CEP17 拷贝数以及 HER2/CEP17 比值。我们观察到,肉眼定量和内吸定量之间的HER2/CEP17比值、平均每个细胞的HER2和CEP17拷贝数具有高度相关性(皮尔逊相关系数分别为0.842、0.916和0.765)。IA 能够计数 124 个细胞到 47044 个细胞(中位数为 5565 个细胞)。在 IA 中,HER2/CEP17 比率和每个细胞 HER2 拷贝数平均值的视觉量化误差范围分别从中位数 0.23 和 0.49 下降到 0.02 和 0.04。曲线估计回归模型显示,每个病例至少需要有 469 或 953 个浸润癌细胞,才能使 HER2/CEP17 比率或每个细胞的 HER2 平均拷贝数的平均误差分别低于 0.1。最后,一个病例平均需要 212.1 秒来执行 IA,这意味着它每秒评估约 130 个细胞,每平方毫米需要 6.7 秒。IA 软件与目测评分的一致性为 95%,灵敏度为 90%,特异性为 100%。所有四个不一致的病例在调整感兴趣区后都能得到一致的结果。总之,这项验证研究强调了 IA 在 HER2 ISH 检测中的实用性,它与目测评分的一致性极佳,并大大降低了误差范围。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Image analysis for bright-field HER2 in situ hybridization: validation for clinical use.

Image analysis for bright-field HER2 in situ hybridization: validation for clinical use.

The aim of the present study was to develop and validate a quantitative image analysis (IA) algorithm to aid pathologists in assessing bright-field HER2 in situ hybridization (ISH) tests in solid cancers. A cohort of 80 sequential cases (40 HER2-negative and 40 HER2-positive) were evaluated for HER2 gene amplification with bright-field ISH. We developed an IA algorithm using the ISH Module from HALO software to automatically quantify HER2 and CEP17 copy numbers per cell as well as the HER2/CEP17 ratio. We observed a high correlation of HER2/CEP17 ratio, an average of HER2 and CEP17 copy number per cell between visual and IA quantification (Pearson's correlation coefficient of 0.842, 0.916, and 0.765, respectively). IA was able to count from 124 cells to 47,044 cells (median of 5565 cells). The margin of error for the visual quantification of the HER2/CEP17 ratio and of the average of HER2 copy number per cell decreased from a median of 0.23 to 0.02 and from a median of 0.49 to 0.04, respectively, in IA. Curve estimation regression models showed that a minimum of 469 or 953 invasive cancer cells per case is needed to reach an average margin of error below 0.1 for the HER2/CEP17 ratio or for the average of HER2 copy number per cell, respectively. Lastly, on average, a case took 212.1 s to execute the IA, which means that it evaluates about 130 cells/s and requires 6.7 s/mm2. The concordance of the IA software with the visual scoring was 95%, with a sensitivity of 90% and a specificity of 100%. All four discordant cases were able to achieve concordant results after the region of interest adjustment. In conclusion, this validation study underscores the usefulness of IA in HER2 ISH testing, displaying excellent concordance with visual scoring and significantly reducing margins of error.

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来源期刊
Virchows Archiv
Virchows Archiv 医学-病理学
CiteScore
7.40
自引率
2.90%
发文量
204
审稿时长
4-8 weeks
期刊介绍: Manuscripts of original studies reinforcing the evidence base of modern diagnostic pathology, using immunocytochemical, molecular and ultrastructural techniques, will be welcomed. In addition, papers on critical evaluation of diagnostic criteria but also broadsheets and guidelines with a solid evidence base will be considered. Consideration will also be given to reports of work in other fields relevant to the understanding of human pathology as well as manuscripts on the application of new methods and techniques in pathology. Submission of purely experimental articles is discouraged but manuscripts on experimental work applicable to diagnostic pathology are welcomed. Biomarker studies are welcomed but need to abide by strict rules (e.g. REMARK) of adequate sample size and relevant marker choice. Single marker studies on limited patient series without validated application will as a rule not be considered. Case reports will only be considered when they provide substantial new information with an impact on understanding disease or diagnostic practice.
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