{"title":"Blechnopsis orientalis (Linnaeus) C. Presl 1753(Blechnaceae)的完整叶绿体基因组。","authors":"Yu-Tong Huang, Wen-Xiao Men, Yan-Ping Xing, Wen-Juan Hou, Yan-Chang Huang, Yan-Yun Yang, Liang Xu","doi":"10.1080/23802359.2024.2385618","DOIUrl":null,"url":null,"abstract":"<p><p><i>Blechnopsis orientalis</i> (Linnaeus) C. Presl (1753) is a fern used both as food and medicine. It is found primarily in southern China and Southeast Asia, thriving in warm, humid shrublands or sparse forest. The total length of the chloroplast genome is 155,211 bp, including a large single-copy region (LSC, 81,877 bp), a small single-copy region (SSC, 21,500 bp), and two inverted repeat regions (IRs, 25,917 bp). The GC content is 41.3%. A total of 131 genes were annotated, including 88 protein-coding genes, eight rRNA genes, and 35 tRNA genes. The phylogenetic analysis using the maximum-likelihood method showed that <i>B. orientalis</i> and <i>Oceaniopteris gibba</i> were closely related. This study provides genomic resources for phylogenetic genetics and resource exploitation of <i>B. orientalis</i>.</p>","PeriodicalId":0,"journal":{"name":"","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-08-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11302461/pdf/","citationCount":"0","resultStr":"{\"title\":\"The complete chloroplast genome of <i>Blechnopsis orientalis</i> (Linnaeus) C. Presl 1753 (Blechnaceae).\",\"authors\":\"Yu-Tong Huang, Wen-Xiao Men, Yan-Ping Xing, Wen-Juan Hou, Yan-Chang Huang, Yan-Yun Yang, Liang Xu\",\"doi\":\"10.1080/23802359.2024.2385618\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Blechnopsis orientalis</i> (Linnaeus) C. Presl (1753) is a fern used both as food and medicine. It is found primarily in southern China and Southeast Asia, thriving in warm, humid shrublands or sparse forest. The total length of the chloroplast genome is 155,211 bp, including a large single-copy region (LSC, 81,877 bp), a small single-copy region (SSC, 21,500 bp), and two inverted repeat regions (IRs, 25,917 bp). The GC content is 41.3%. A total of 131 genes were annotated, including 88 protein-coding genes, eight rRNA genes, and 35 tRNA genes. The phylogenetic analysis using the maximum-likelihood method showed that <i>B. orientalis</i> and <i>Oceaniopteris gibba</i> were closely related. This study provides genomic resources for phylogenetic genetics and resource exploitation of <i>B. orientalis</i>.</p>\",\"PeriodicalId\":0,\"journal\":{\"name\":\"\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0,\"publicationDate\":\"2024-08-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11302461/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2024.2385618\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2385618","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
Blechnopsis orientalis (Linnaeus) C. Presl(1753 年)是一种既可食用又可入药的蕨类植物。它主要分布在中国南部和东南亚,生长在温暖、潮湿的灌木丛或疏林中。叶绿体基因组总长度为 155,211 bp,包括一个大的单拷贝区(LSC,81,877 bp)、一个小的单拷贝区(SSC,21,500 bp)和两个反向重复区(IRs,25,917 bp)。GC 含量为 41.3%。共注释了 131 个基因,包括 88 个蛋白质编码基因、8 个 rRNA 基因和 35 个 tRNA 基因。采用最大似然法进行的系统进化分析表明,B. orientalis 和 Oceaniopteris gibba 关系密切。该研究为东方蝶的系统发育遗传学和资源开发利用提供了基因组资源。
The complete chloroplast genome of Blechnopsis orientalis (Linnaeus) C. Presl 1753 (Blechnaceae).
Blechnopsis orientalis (Linnaeus) C. Presl (1753) is a fern used both as food and medicine. It is found primarily in southern China and Southeast Asia, thriving in warm, humid shrublands or sparse forest. The total length of the chloroplast genome is 155,211 bp, including a large single-copy region (LSC, 81,877 bp), a small single-copy region (SSC, 21,500 bp), and two inverted repeat regions (IRs, 25,917 bp). The GC content is 41.3%. A total of 131 genes were annotated, including 88 protein-coding genes, eight rRNA genes, and 35 tRNA genes. The phylogenetic analysis using the maximum-likelihood method showed that B. orientalis and Oceaniopteris gibba were closely related. This study provides genomic resources for phylogenetic genetics and resource exploitation of B. orientalis.