Desertibaculum subflavum gen.

IF 1.8 3区 生物学 Q4 MICROBIOLOGY
Chu-Ying Feng, Huan-Huan He, Shuai Li, Zhuo-Huan Zheng, Yi-Jun Mo, Wen-Hui Lian, Chun-Yan Lu, Dong-Ya Zhang, Wen-Jun Li, Lei Dong
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引用次数: 0

摘要

从中国新疆库姆塔格沙漠采集的沙质土壤中分离出一种新型杆状细菌,命名为 SYSU D60015T 菌株,该菌株可形成淡黄色菌落。细胞革兰氏染色阴性,氧化酶阳性,过氧化氢酶阴性,有单极鞭毛。最适生长温度为 28 至 37 °C,pH 值为 7.0,NaCl 含量为 0-0.5%(W/V)。细胞中最主要的脂肪酸(大于 5%)是总特征 8(C18:1 ω7c 和/或 C18:1 ω6c)、C19:0 环 ω8c、C18:1 ω7c 11-甲基和 C16:0。极性脂质图谱中包含一种磷脂酰乙醇胺、一种二磷脂酰甘油、一种磷脂酰甘油、一种不明磷脂、三种不明氨基脂、两种不明氨基磷脂和七种不明脂质。唯一的呼吸醌是泛醌-10。根据 16S rRNA 基因序列系统进化分析,发现 SYSU D60015T 菌株在 Sneathiellaceae 家族中形成一个独特的系,其 16S rRNA 基因序列与 Taonella mepensis H1T 相似度为 90.8%,与 Ferrovibrio denitrificans S3T 相似度为 90.2%。SYSU D60015T 的基因组大小为 5.66 Mb,DNA G + C 含量为 68.2%。SYSU D60015T 与 Ferrovibrio terrae K5T 之间的数字 DNA-DNA 杂交(dDDH,18.0%)、平均核苷酸同一性(ANI,77.5%)和氨基酸同一性(AAI,56.0%)值较低,表明 SYSU D60015T 可能代表一个不同的属。根据系统发生学、表型学、化学分类学和基因组学数据,我们提出 Desertibaculum subflavum gen.模式菌株为 SYSU D60015T (= NBRC 112952T = CGMCC 1.16256T)。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Desertibaculum subflavum gen. nov., sp. nov., a novel member of the family Sneathiellaceae isolated from the Kumtag Desert soil

Desertibaculum subflavum gen. nov., sp. nov., a novel member of the family Sneathiellaceae isolated from the Kumtag Desert soil

Desertibaculum subflavum gen. nov., sp. nov., a novel member of the family Sneathiellaceae isolated from the Kumtag Desert soil

A novel rod-shaped bacterium, designated as strain SYSU D60015T that formed yellowish colonies was isolated from a sandy soil collected from the Kumtag Desert in Xinjiang, China. Cells were Gram-stain-negative, oxidase-positive, catalase-negative and motile with a single polar flagellum. Growth optimum occurred between 28 and 37 °C, pH 7.0 and with 0–0.5% (W/V) NaCl. The predominant cellular fatty acids (> 5%) were summed feature 8 (C18:1 ω7c and/or C18:1 ω6c), C19:0 cyclo ω8c, C18:1 ω7c 11-methyl and C16:0. The polar lipid profile contained one phosphatidylethanolamine, one diphosphatidylglycerol, one phosphatidylglycerol, one unidentified phospholipid, three unidentified aminolipids, two unidentified aminophospholipids and seven unidentified lipids. The only respiratory quinone was ubiquinone-10. Based on 16S rRNA gene sequence phylogenetic analysis, strain SYSU D60015T was found to form a distinct linage within the family Sneathiellaceae, and had 16S rRNA gene sequence similarities of 90.8% to Taonella mepensis H1T, and 90.2% to Ferrovibrio denitrificans S3T. The genome of SYSU D60015T was 5.66 Mb in size with 68.2% of DNA G + C content. The low digital DNA-DNA hybridization (dDDH, 18.0%), average nucleotide identity (ANI, 77.5%) and amino acid identity (AAI, 56.0%) values between SYSU D60015T and Ferrovibrio terrae K5T indicated that SYSU D60015T might represent a distinct genus. Based on the phylogenetic, phenotypic, chemotaxonomic and genomic data, we propose Desertibaculum subflavum gen. nov., sp. nov. as a novel species of a new genus within the family Sneathiellaceae. The type strain is SYSU D60015T (= NBRC 112952T = CGMCC 1.16256T).

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来源期刊
CiteScore
5.60
自引率
11.50%
发文量
104
审稿时长
3 months
期刊介绍: Antonie van Leeuwenhoek publishes papers on fundamental and applied aspects of microbiology. Topics of particular interest include: taxonomy, structure & development; biochemistry & molecular biology; physiology & metabolic studies; genetics; ecological studies; especially molecular ecology; marine microbiology; medical microbiology; molecular biological aspects of microbial pathogenesis and bioinformatics.
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