利用 240 GHz 的场域快速扫描 EPR 研究室温下的蛋白质功能动态

IF 2 3区 化学 Q3 BIOCHEMICAL RESEARCH METHODS
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引用次数: 0

摘要

我们介绍了在 8.6 T 和 240 GHz 下的场域快速扫描 (RS) 电子顺磁共振 (EPR)。为实现这一技术,我们升级了自制的 EPR 光谱仪,并配备了 FPGA 数字转换器和实时处理软件。该软件利用希尔伯特变换恢复同相(I)和正交(Q)通道,从而从它们的组合幅度(I2+Q2)中恢复原始吸收和色散信号χ′和χ′。幅值平均比实时相干平均更简单,而且由于消除了源接收器相位漂移的影响,还具有允许长时间尺度信号平均(至少达 2.5×106 次扫描)的额外好处。在相同的实验条件下,我们的快速扫描(RS)EPR 在按采集时间的平方根缩放后,其信噪比约为连续波(CW)EPR 的两倍。我们将 RS EPR 作为最近报道的时间分辨钆-钆 EPR(TiGGER)[Maity 等人,2023 年]的扩展,它能够通过钆-钆偶极耦合的变化监测光致蛋白光周期中残基间距离的变化。RS 与 CW 不同,它能以 10 毫秒的时间分辨率返回随时间变化的场扫描光谱,从而为 TiGGER 记录的静态场瞬态增加了第二个维度。我们能够利用 RS TiGGER 跟踪 AsLOV2 随时间和温度变化的动力学,AsLOV2 是燕麦中的一种光激活趋光蛋白结构域。本文介绍的结果结合了 RS EPR 的优点以及钆螯合物在高磁场下改进的光谱分辨率和灵敏度。未来,在高磁场下的场域 RS EPR 可能有助于研究溶液状态下难以获得时间分辨率的其他实时动力学过程。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Field-domain rapid-scan EPR at 240 GHz for studies of protein functional dynamics at room temperature

Field-domain rapid-scan EPR at 240 GHz for studies of protein functional dynamics at room temperature

We present field-domain rapid-scan (RS) electron paramagnetic resonance (EPR) at 8.6 T and 240 GHz. To enable this technique, we upgraded a home-built EPR spectrometer with an FPGA-enabled digitizer and real-time processing software. The software leverages the Hilbert transform to recover the in-phase (I) and quadrature (Q) channels, and therefore the raw absorptive and dispersive signals, χ and χ, from their combined magnitude (I2+Q2). Averaging a magnitude is simpler than real-time coherent averaging and has the added benefit of permitting long-timescale signal averaging (up to at least 2.5×106 scans) because it eliminates the effects of source-receiver phase drift. Our rapid-scan (RS) EPR provides a signal-to-noise ratio that is approximately twice that of continuous wave (CW) EPR under the same experimental conditions, after scaling by the square root of acquisition time. We apply our RS EPR as an extension of the recently reported time-resolved Gd-Gd EPR (TiGGER) [Maity et al., 2023], which is able to monitor inter-residue distance changes during the photocycle of a photoresponsive protein through changes in the Gd-Gd dipolar couplings. RS, opposed to CW, returns field-swept spectra as a function of time with 10 ms time resolution, and thus, adds a second dimension to the static field transients recorded by TiGGER. We were able to use RS TiGGER to track time-dependent and temperature-dependent kinetics of AsLOV2, a light-activated phototropin domain found in oats. The results presented here combine the benefits of RS EPR with the improved spectral resolution and sensitivity of Gd chelates at high magnetic fields. In the future, field-domain RS EPR at high magnetic fields may enable studies of other real-time kinetic processes with time resolutions that are otherwise difficult to access in the solution state.

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来源期刊
CiteScore
3.80
自引率
13.60%
发文量
150
审稿时长
69 days
期刊介绍: The Journal of Magnetic Resonance presents original technical and scientific papers in all aspects of magnetic resonance, including nuclear magnetic resonance spectroscopy (NMR) of solids and liquids, electron spin/paramagnetic resonance (EPR), in vivo magnetic resonance imaging (MRI) and spectroscopy (MRS), nuclear quadrupole resonance (NQR) and magnetic resonance phenomena at nearly zero fields or in combination with optics. The Journal''s main aims include deepening the physical principles underlying all these spectroscopies, publishing significant theoretical and experimental results leading to spectral and spatial progress in these areas, and opening new MR-based applications in chemistry, biology and medicine. The Journal also seeks descriptions of novel apparatuses, new experimental protocols, and new procedures of data analysis and interpretation - including computational and quantum-mechanical methods - capable of advancing MR spectroscopy and imaging.
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