克隆维多利亚瀑布雨林腐木元基因组中的纤维素酶基因。

Makhosazana Nyathi, Zephaniah Dhlamini, Thembekile Ncube
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引用次数: 0

摘要

维多利亚瀑布热带雨林是一个受保护的地方,其森林地面蕴藏着大量参与生物质降解的纤维素分解微生物。这项研究收集了雨林中的腐烂原木和土壤,以便从它们的元基因组中对纤维素酶进行生物勘探。从复合样本中分离出元基因组 DNA。使用退化纤维素酶引物扩增元基因组中的纤维素酶基因。将得到的扩增子克隆到 Z 型大肠杆菌 DH5α 中,通过功能筛选分析细胞外纤维素酶的生产情况。对克隆进行功能筛选的结果是,一个克隆(克隆-i)在胞外纤维素酶生产方面呈阳性。对克隆-i 进行了浸没式发酵,以生产纤维素酶。对纤维素酶进行了表征,以确定其活性的最适 pH 值和温度。确定了 Clone-i 生产的纤维素酶的多样性。在 50°C 和 pH 值为 5 的条件下培养 72 小时后,Clone-i 的酶活性达到最佳。纤维素溶解克隆-i'分离物显示了维多利亚瀑布雨林作为酶生物勘探地点的潜力,反映了元基因组学是微生物生态学的一种宝贵工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Cloning Cellulase Genes from Victoria Falls Rainforest Decaying Logs Metagenome.

The Victoria Falls rainforest is a protected site whose forest floors harbor a host of cellulolytic microorganisms involved in biomass degradation. This study collected decaying logs and soil from the rainforest for bioprospecting cellulases from their metagenomes. Metagenomic DNA was isolated from the compound sample. Degenerate cellulase primers were used to amplify cellulase genes in the metagenome. The resulting amplicons cloned into Z-competent Escherichia coli DH5α were analyzed by functional screening for the production of cellulase extracellularly. Functional screening of the clones resulted in one clone (Clone-i) testing positive for extracellular cellulase production. Submerged fermentation of Clone-i was carried out for cellulase production. The cellulases were characterized to determine their activity's optimum pH and temperature. The diversity of the cellulases produced by Clone-i was determined. Clone-i's optimum enzyme activity was observed after 72 hours of incubation at 50°C and pH 5. Clone-i produced 80% more exoglucanases as compared to endoglucanases. The cellulolytic Clone-i' isolate shows Victoria Falls rainforest's potential as an enzyme bioprospecting site, reflecting that metagenomics is a valuable tool in microbial ecology.

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