Hui-Ting Tang, Chun-Fang Li, Shi-You Zuo, Pei-Feng Liu
{"title":"Polyspora axillaris(菊科)的完整叶绿体基因组。","authors":"Hui-Ting Tang, Chun-Fang Li, Shi-You Zuo, Pei-Feng Liu","doi":"10.1080/23802359.2024.2383672","DOIUrl":null,"url":null,"abstract":"<p><p><i>Polyspora axillaris</i> (Roxb. ex Ker Gawl.) Sweet 1825, is a shrub or tree that is about 9 meters tall in the Theaceae family, mainly distributed in China and Vietnam, and it is widely used as a green tree species in many regions owing to its rapid growth and good adaptability. It is rich in various beneficial extracts for humans, but there are limited studies on it. In this study, we sequenced and annotated the complete plastome of <i>P. axillaris</i>. The chloroplast genome length of <i>P. axillaris</i> is 156,770 bp, with a total of 132 genes, including 37 tRNA genes, 8 rRNA genes and 87 protein-coding genes. The complete chloroplast genome of <i>P. axillaris</i> contains two Inverted Repeats (IRs) of 26,077 bp, a Large Single-Copy (LSC) region of 86,286 bp and a Small Single-Copy (SSC) region of 18,330 bp. The overall G/C content in the chloroplast is 37.3%. Phylogenetic inference shows that <i>P. axillaris</i> formed a sister relationship with <i>P. hainanensis</i>, along with 10 Theaceae species. The research result of <i>P. axillaris</i> will contribute to the genetic preservation of the species and the phylogenetic study of <i>Polyspora</i>.</p>","PeriodicalId":0,"journal":{"name":"","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-07-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11285278/pdf/","citationCount":"0","resultStr":"{\"title\":\"The complete chloroplast genome of <i>Polyspora axillaris</i> (Theaceae).\",\"authors\":\"Hui-Ting Tang, Chun-Fang Li, Shi-You Zuo, Pei-Feng Liu\",\"doi\":\"10.1080/23802359.2024.2383672\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Polyspora axillaris</i> (Roxb. ex Ker Gawl.) Sweet 1825, is a shrub or tree that is about 9 meters tall in the Theaceae family, mainly distributed in China and Vietnam, and it is widely used as a green tree species in many regions owing to its rapid growth and good adaptability. It is rich in various beneficial extracts for humans, but there are limited studies on it. In this study, we sequenced and annotated the complete plastome of <i>P. axillaris</i>. The chloroplast genome length of <i>P. axillaris</i> is 156,770 bp, with a total of 132 genes, including 37 tRNA genes, 8 rRNA genes and 87 protein-coding genes. The complete chloroplast genome of <i>P. axillaris</i> contains two Inverted Repeats (IRs) of 26,077 bp, a Large Single-Copy (LSC) region of 86,286 bp and a Small Single-Copy (SSC) region of 18,330 bp. The overall G/C content in the chloroplast is 37.3%. Phylogenetic inference shows that <i>P. axillaris</i> formed a sister relationship with <i>P. hainanensis</i>, along with 10 Theaceae species. The research result of <i>P. axillaris</i> will contribute to the genetic preservation of the species and the phylogenetic study of <i>Polyspora</i>.</p>\",\"PeriodicalId\":0,\"journal\":{\"name\":\"\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0,\"publicationDate\":\"2024-07-26\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11285278/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2024.2383672\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2383672","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
Polyspora axillaris (Roxb. ex Ker Gawl.) Sweet 1825,为菊科灌木或乔木,高约 9 米,主要分布于中国和越南,因其生长迅速、适应性强,在许多地区被广泛用作绿化树种。它富含多种对人体有益的提取物,但有关它的研究却很有限。在这项研究中,我们对 axillaris 的完整质体组进行了测序和注释。P. axillaris 的叶绿体基因组长度为 156,770 bp,共有 132 个基因,包括 37 个 tRNA 基因、8 个 rRNA 基因和 87 个编码蛋白质的基因。叶绿体基因组包含两个 26,077 bp 的反向重复区(IR)、一个 86,286 bp 的大单拷贝区(LSC)和一个 18,330 bp 的小单拷贝区(SSC)。叶绿体中总的 G/C 含量为 37.3%。系统发育推断表明,斧头草与海南草以及 10 个山茶科植物是姊妹关系。该研究成果将有助于该物种的遗传保护和多孢植物的系统发育研究。
The complete chloroplast genome of Polyspora axillaris (Theaceae).
Polyspora axillaris (Roxb. ex Ker Gawl.) Sweet 1825, is a shrub or tree that is about 9 meters tall in the Theaceae family, mainly distributed in China and Vietnam, and it is widely used as a green tree species in many regions owing to its rapid growth and good adaptability. It is rich in various beneficial extracts for humans, but there are limited studies on it. In this study, we sequenced and annotated the complete plastome of P. axillaris. The chloroplast genome length of P. axillaris is 156,770 bp, with a total of 132 genes, including 37 tRNA genes, 8 rRNA genes and 87 protein-coding genes. The complete chloroplast genome of P. axillaris contains two Inverted Repeats (IRs) of 26,077 bp, a Large Single-Copy (LSC) region of 86,286 bp and a Small Single-Copy (SSC) region of 18,330 bp. The overall G/C content in the chloroplast is 37.3%. Phylogenetic inference shows that P. axillaris formed a sister relationship with P. hainanensis, along with 10 Theaceae species. The research result of P. axillaris will contribute to the genetic preservation of the species and the phylogenetic study of Polyspora.