Yingying Wan, Miaohuan Xiong, Lingfeng Zhu, Haiyan Ni, Xuelan Chen, Bin Liu, Jian He
{"title":"从湖边土壤中分离出来的 Salinibacterium soli sp.","authors":"Yingying Wan, Miaohuan Xiong, Lingfeng Zhu, Haiyan Ni, Xuelan Chen, Bin Liu, Jian He","doi":"10.1099/ijsem.0.006479","DOIUrl":null,"url":null,"abstract":"<p><p>A Gram-stain-positive, rod-shaped, non-spore-forming and non-motile bacterium, designated strain WY-16<sup>T</sup>. Growth was observed at 20-42 °C (optimum, 30 °C), pH 6-9 (optimum, pH 7) and salinity of 0-3 % (w/v; optimum, 1 %). Phylogenetic analysis based on genome sequences indicated that WY-16<sup>T</sup> was affiliated to the family <i>Microbacteriaceae</i> and most closely related to <i>Salinibacterium xinjiangense</i> and <i>Salinibacterium amurskyense</i>. The average nucleotide identity values between strain WY-16<sup>T</sup> and <i>S. xinjiangense</i> and <i>S. amurskyense</i> were 74.7 and 72.5 %, respectively. The digital DNA-DNA hybridization values between strain WY-16<sup>T</sup> and <i>S. xinjiangense</i> and <i>S. amurskyense</i> were 19.6 and 18.6 %, respectively. The predominant fatty acids were anteiso-C<sub>15 : 0</sub>, iso-C<sub>16 : 0</sub> and iso-C<sub>16 : 0</sub> 10-methyl. The major menaquinones were MK-12, MK-13, MK-14 and MK-15. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, one unidentified glycolipid and one unidentified phospholipid. The cell-wall peptidoglycan contained 2,4-diaminobutyric acid as the diamino acid and ribose, rhamnose, glucose and galactose were the major cell-wall sugars. Based on phenotypic, genotypic and phylogenetic evidence, strain WY-16<sup>T</sup> represents a novel species in the genus <i>Salinibacterium</i>, for which the name <i>Salinibacterium soli</i> sp. nov. is proposed. The type strain is WY-16<sup>T</sup> (=GDMCC 1.4011<sup>T</sup>=JCM 36421<sup>T</sup>).</p>","PeriodicalId":2,"journal":{"name":"ACS Applied Bio Materials","volume":null,"pages":null},"PeriodicalIF":4.6000,"publicationDate":"2024-07-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"<i>Salinibacterium soli</i> sp. nov., isolated from lakeside soil.\",\"authors\":\"Yingying Wan, Miaohuan Xiong, Lingfeng Zhu, Haiyan Ni, Xuelan Chen, Bin Liu, Jian He\",\"doi\":\"10.1099/ijsem.0.006479\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>A Gram-stain-positive, rod-shaped, non-spore-forming and non-motile bacterium, designated strain WY-16<sup>T</sup>. Growth was observed at 20-42 °C (optimum, 30 °C), pH 6-9 (optimum, pH 7) and salinity of 0-3 % (w/v; optimum, 1 %). Phylogenetic analysis based on genome sequences indicated that WY-16<sup>T</sup> was affiliated to the family <i>Microbacteriaceae</i> and most closely related to <i>Salinibacterium xinjiangense</i> and <i>Salinibacterium amurskyense</i>. The average nucleotide identity values between strain WY-16<sup>T</sup> and <i>S. xinjiangense</i> and <i>S. amurskyense</i> were 74.7 and 72.5 %, respectively. The digital DNA-DNA hybridization values between strain WY-16<sup>T</sup> and <i>S. xinjiangense</i> and <i>S. amurskyense</i> were 19.6 and 18.6 %, respectively. The predominant fatty acids were anteiso-C<sub>15 : 0</sub>, iso-C<sub>16 : 0</sub> and iso-C<sub>16 : 0</sub> 10-methyl. The major menaquinones were MK-12, MK-13, MK-14 and MK-15. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, one unidentified glycolipid and one unidentified phospholipid. The cell-wall peptidoglycan contained 2,4-diaminobutyric acid as the diamino acid and ribose, rhamnose, glucose and galactose were the major cell-wall sugars. Based on phenotypic, genotypic and phylogenetic evidence, strain WY-16<sup>T</sup> represents a novel species in the genus <i>Salinibacterium</i>, for which the name <i>Salinibacterium soli</i> sp. nov. is proposed. The type strain is WY-16<sup>T</sup> (=GDMCC 1.4011<sup>T</sup>=JCM 36421<sup>T</sup>).</p>\",\"PeriodicalId\":2,\"journal\":{\"name\":\"ACS Applied Bio Materials\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.6000,\"publicationDate\":\"2024-07-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"ACS Applied Bio Materials\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1099/ijsem.0.006479\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MATERIALS SCIENCE, BIOMATERIALS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"ACS Applied Bio Materials","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1099/ijsem.0.006479","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MATERIALS SCIENCE, BIOMATERIALS","Score":null,"Total":0}
Salinibacterium soli sp. nov., isolated from lakeside soil.
A Gram-stain-positive, rod-shaped, non-spore-forming and non-motile bacterium, designated strain WY-16T. Growth was observed at 20-42 °C (optimum, 30 °C), pH 6-9 (optimum, pH 7) and salinity of 0-3 % (w/v; optimum, 1 %). Phylogenetic analysis based on genome sequences indicated that WY-16T was affiliated to the family Microbacteriaceae and most closely related to Salinibacterium xinjiangense and Salinibacterium amurskyense. The average nucleotide identity values between strain WY-16T and S. xinjiangense and S. amurskyense were 74.7 and 72.5 %, respectively. The digital DNA-DNA hybridization values between strain WY-16T and S. xinjiangense and S. amurskyense were 19.6 and 18.6 %, respectively. The predominant fatty acids were anteiso-C15 : 0, iso-C16 : 0 and iso-C16 : 0 10-methyl. The major menaquinones were MK-12, MK-13, MK-14 and MK-15. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, one unidentified glycolipid and one unidentified phospholipid. The cell-wall peptidoglycan contained 2,4-diaminobutyric acid as the diamino acid and ribose, rhamnose, glucose and galactose were the major cell-wall sugars. Based on phenotypic, genotypic and phylogenetic evidence, strain WY-16T represents a novel species in the genus Salinibacterium, for which the name Salinibacterium soli sp. nov. is proposed. The type strain is WY-16T (=GDMCC 1.4011T=JCM 36421T).