{"title":"分析 Hipposideros pratti 的完整线粒体基因组序列。","authors":"Tiantian Jiang, Jingying He, Jing Li, Liming Zhao, Hongxing Niu, Yanzhen Bu","doi":"10.1080/23802359.2024.2381806","DOIUrl":null,"url":null,"abstract":"<p><p>In order to explore the characteristics of the mitochondrial genome sequence of Pratt's leaf-nosed bat (<i>Hipposideros pratti</i> Thomas 1891) and understand their phylogenetic status in Chiroptera, this study determined the mitochondrial genome sequences of <i>H. pratti</i> from five regions in China using high-throughput sequencing technology, sequence assembly, and genome annotation. The results showed that these sequences contained 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 non-coding region, all exhibiting a significant AT bias. Based on the phylogenetic tree constructed using 13 protein-coding genes from 15 Chiroptera species, the study found that <i>H. pratti</i> from the five regions clustered together, and then clustered with <i>H. lylei</i> into a single clade. Meanwhile, <i>H. pratti</i> from Jiangxi, Fujian, and Guangdong regions of China showed closer genetic relationships, while <i>H. pratti</i> from Yunnan and Henan regions of China exhibited closer genetic relationships. This study not only supplemented the mitochondrial genome database of <i>H. pratti</i> but also laid a foundation for genetic variation, molecular classification, and evolutionary studies of <i>H. pratti</i>.</p>","PeriodicalId":0,"journal":{"name":"","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-07-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11271134/pdf/","citationCount":"0","resultStr":"{\"title\":\"Analysis of the complete mitochondrial genome sequence of <i>Hipposideros pratti</i>.\",\"authors\":\"Tiantian Jiang, Jingying He, Jing Li, Liming Zhao, Hongxing Niu, Yanzhen Bu\",\"doi\":\"10.1080/23802359.2024.2381806\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>In order to explore the characteristics of the mitochondrial genome sequence of Pratt's leaf-nosed bat (<i>Hipposideros pratti</i> Thomas 1891) and understand their phylogenetic status in Chiroptera, this study determined the mitochondrial genome sequences of <i>H. pratti</i> from five regions in China using high-throughput sequencing technology, sequence assembly, and genome annotation. The results showed that these sequences contained 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 non-coding region, all exhibiting a significant AT bias. Based on the phylogenetic tree constructed using 13 protein-coding genes from 15 Chiroptera species, the study found that <i>H. pratti</i> from the five regions clustered together, and then clustered with <i>H. lylei</i> into a single clade. Meanwhile, <i>H. pratti</i> from Jiangxi, Fujian, and Guangdong regions of China showed closer genetic relationships, while <i>H. pratti</i> from Yunnan and Henan regions of China exhibited closer genetic relationships. This study not only supplemented the mitochondrial genome database of <i>H. pratti</i> but also laid a foundation for genetic variation, molecular classification, and evolutionary studies of <i>H. pratti</i>.</p>\",\"PeriodicalId\":0,\"journal\":{\"name\":\"\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0,\"publicationDate\":\"2024-07-23\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11271134/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2024.2381806\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2381806","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
为探讨普氏叶鼻蝠(Hipposideros pratti Thomas 1891)线粒体基因组序列的特征,了解其在脊索动物门中的系统发育地位,本研究利用高通量测序技术,通过序列组装和基因组注释,测定了中国5个地区普氏叶鼻蝠的线粒体基因组序列。结果表明,这些序列包含13个蛋白编码基因、22个tRNA基因、2个rRNA基因和1个非编码区,均表现出明显的AT偏倚。研究发现,根据利用来自15种脊索动物的13个蛋白编码基因构建的系统发生树,五个地区的H. pratti聚类在一起,然后与H. lylei聚类为一个支系。同时,中国江西、福建和广东地区的H. pratti表现出更密切的遗传关系,而中国云南和河南地区的H. pratti则表现出更密切的遗传关系。该研究不仅补充了普氏原鲤线粒体基因组数据库,而且为普氏原鲤的遗传变异、分子分类和进化研究奠定了基础。
Analysis of the complete mitochondrial genome sequence of Hipposideros pratti.
In order to explore the characteristics of the mitochondrial genome sequence of Pratt's leaf-nosed bat (Hipposideros pratti Thomas 1891) and understand their phylogenetic status in Chiroptera, this study determined the mitochondrial genome sequences of H. pratti from five regions in China using high-throughput sequencing technology, sequence assembly, and genome annotation. The results showed that these sequences contained 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes, and 1 non-coding region, all exhibiting a significant AT bias. Based on the phylogenetic tree constructed using 13 protein-coding genes from 15 Chiroptera species, the study found that H. pratti from the five regions clustered together, and then clustered with H. lylei into a single clade. Meanwhile, H. pratti from Jiangxi, Fujian, and Guangdong regions of China showed closer genetic relationships, while H. pratti from Yunnan and Henan regions of China exhibited closer genetic relationships. This study not only supplemented the mitochondrial genome database of H. pratti but also laid a foundation for genetic variation, molecular classification, and evolutionary studies of H. pratti.