单细胞测序揭示新型增殖细胞类型:肾细胞癌预后和治疗反应的关键因素。

IF 3.2 4区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL
Bicheng Ye, Hongsheng Ji, Meng Zhu, Anbang Wang, Jingsong Tang, Yong Liang, Qing Zhang
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引用次数: 0

摘要

肾细胞癌(RCC)有多种亚型,每种亚型都有独特的遗传和形态特征。本研究利用单细胞 RNA 测序来探索 RCC 的分子异质性。在RCC肿瘤中发现了一种被称为 "Prol "的高增殖细胞亚群,它的增加与患者的预后有关。研究人员利用包含传统回归、机器学习和深度学习算法的人工智能网络,开发出了能够预测预后的Prol特征。与其他特征相比,该特征在预测 RCC 预后方面表现优异,并具有泛癌症预后能力。Prol特征得分高的RCC患者对靶向疗法和免疫疗法表现出抗药性。此外,蛋白质组学和定量实时聚合酶链反应都验证了 Prol 特征中的关键基因 CEP55。我们的研究结果可为了解 RCC 的分子和细胞机制提供新的视角,并促进新型生物标记物和治疗靶点的开发。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Single-cell sequencing reveals novel proliferative cell type: a key player in renal cell carcinoma prognosis and therapeutic response.

Single-cell sequencing reveals novel proliferative cell type: a key player in renal cell carcinoma prognosis and therapeutic response.

Renal cell carcinoma (RCC) is characterized by a variety of subtypes, each defined by unique genetic and morphological features. This study utilizes single-cell RNA sequencing to explore the molecular heterogeneity of RCC. A highly proliferative cell subset, termed as "Prol," was discovered within RCC tumors, and its increased presence was linked to poorer patient outcomes. An artificial intelligence network, encompassing traditional regression, machine learning, and deep learning algorithms, was employed to develop a Prol signature capable of predicting prognosis. The signature demonstrated superior performance in predicting RCC prognosis compared to other signatures and exhibited pan-cancer prognostic capabilities. RCC patients with high Prol signature scores exhibited resistance to targeted therapies and immunotherapies. Furthermore, the key gene CEP55 from the Prol signature was validated by both proteinomics and quantitative real time polymerase chain reaction. Our findings may provide new insights into the molecular and cellular mechanisms of RCC and facilitate the development of novel biomarkers and therapeutic targets.

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来源期刊
Clinical and Experimental Medicine
Clinical and Experimental Medicine 医学-医学:研究与实验
CiteScore
4.80
自引率
2.20%
发文量
159
审稿时长
2.5 months
期刊介绍: Clinical and Experimental Medicine (CEM) is a multidisciplinary journal that aims to be a forum of scientific excellence and information exchange in relation to the basic and clinical features of the following fields: hematology, onco-hematology, oncology, virology, immunology, and rheumatology. The journal publishes reviews and editorials, experimental and preclinical studies, translational research, prospectively designed clinical trials, and epidemiological studies. Papers containing new clinical or experimental data that are likely to contribute to changes in clinical practice or the way in which a disease is thought about will be given priority due to their immediate importance. Case reports will be accepted on an exceptional basis only, and their submission is discouraged. The major criteria for publication are clarity, scientific soundness, and advances in knowledge. In compliance with the overwhelmingly prevailing request by the international scientific community, and with respect for eco-compatibility issues, CEM is now published exclusively online.
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