对马铃薯(Solanum tuberosum)PYL基因的全面分析凸显了它们在应激反应中的作用。

IF 4.6 Q2 MATERIALS SCIENCE, BIOMATERIALS
Shareef Gul, Hameed Gul, Muhammad Shahzad, Ikram Ullah, Ali Shahzad, Shahid Ullah Khan
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引用次数: 0

摘要

脱落酸(ABA)调节植物的发育、种子萌发和胁迫反应。PYR1-like(PYL)蛋白是 ABA 信号传导的关键。然而,人们对马铃薯(Solanum tuberosum)中PYL基因的进化和表达仍然知之甚少。在此,我们分析并鉴定了马铃薯基因组中的 17 个PYL 基因,并根据系统发育分析将其分为三组。这些基因分布在九条染色体上,预测蛋白亚细胞定位主要在细胞质中。这些 StPYLs 揭示了各组之间保守的外显子结构和结构域。蛋白-蛋白相互作用和 microRNA 网络预测 StPYLs 的相互作用是 ABA 信号的关键组成部分,强调了它们在马铃薯胁迫管理和生长调节中的关键作用。不同组织和不同胁迫下的表达谱分析揭示了它们不同的表达模式。此外,我们还通过反转录定量 PCR 验证了所选 StPYLs 在干旱、盐分和根腐病胁迫下的表达模式。结果表明,StPYL6 在这些胁迫下持续上调,而 StPYL11 则随着时间的推移明显下调。其他基因在干旱和盐胁迫下表现出下调,而在疫霉菌胁迫下则表现出上调。总之,我们的研究结果表明了PYL基因在非生物和生物胁迫中的潜在作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Comprehensive analysis of potato (Solanum tuberosum) PYL genes highlights their role in stress responses.

Abscisic acid (ABA) regulates plant development, seed germination, and stress responses. The PYR1-like (PYL) proteins are essential for ABA signalling. However, the evolution and expression of PYL genes in potato (Solanum tuberosum ) remain poorly understood. Here, we analysed and identified 17 PYL genes in the potato genome, which were categorised into three groups based on phylogenetic analysis. These genes are distributed across nine chromosomes with predicted proteins subcellar localisation primarily in the cytoplasm. These StPYLs revealed conserved exon structures and domains among the groups. Promoter region analysis indicated hormone and stress-related elements in all StPYL s. Protein-protein interactions and microRNA networks predicted that the interactions of StPYLs are crucial components of ABA signalling, underlining their pivotal role in stress management and growth regulation in potato. Expression profiling across different tissues and under various stresses revealed their varied expression pattern. Further, we validated the expression pattern of selected StPYLs through reverse transcription quantitative PCR under drought, salt, and Phytophthora infestans stresses. This revealed consistent upregulation of StPYL6 in these stresses, while StPYL11 exhibited significant downregulation over time. Other genes showed downregulation under drought and salt stresses while upregulation under P. infestans . Overall, our results suggested the potential role of PYL genes in abiotic and biotic stresses.

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来源期刊
ACS Applied Bio Materials
ACS Applied Bio Materials Chemistry-Chemistry (all)
CiteScore
9.40
自引率
2.10%
发文量
464
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