抗组胺药物地氯雷他定与 dsDNA 之间相互作用的光谱、电化学和分子对接研究

IF 2.6 4区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Mehmetcan Bilkay , Cigdem Kanbes-Dindar , Burcin Bozal-Palabiyik , Gokcen Eren , Hayriye Eda Satana Kara , Bengi Uslu
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引用次数: 0

摘要

通过利用荧光光谱、电化学和分子对接方法,本研究探讨了抗组胺药物地氯雷他定与小牛胸腺双链 DNA(ct-dsDNA)之间的相互作用。通过差分脉冲伏安法(DPV)测定,脱氧鸟苷(dGuo)和脱氧腺苷(dAdo)的氧化信号在与不同浓度的去氯雷他定一起孵育时减弱。这种变化归因于地氯雷他定与ct-dsDNA的结合机制。在整个电化学实验中,地氯雷他定与ct-dsDNA的结合常数(Kb)被测定为2.2 × 105 M-1。为了进一步了解地氯雷他定与ct-dsDNA的相互作用机制,我们进行了一系列光谱实验和分子对接模拟。通过使用荧光光谱技术,我们发现在 25 °C 温度下,Kb 值为 8.85 × 104 M-1。总之,利用电化学和光谱技术以及分子对接研究,可以预测地氯雷他定能够通过沟结合与ct-dsDNA相互作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Spectroscopic, electrochemical, and molecular docking studies of the interaction between the antihistamine drug desloratadine and dsDNA

Spectroscopic, electrochemical, and molecular docking studies of the interaction between the antihistamine drug desloratadine and dsDNA

Through the utilization of fluorescence spectroscopy, electrochemical, and molecular docking methods, this research investigates the interaction between the antihistamine drug desloratadine and calf thymus double-stranded DNA (ct-dsDNA). Deoxyguanosine (dGuo) and deoxyadenosine (dAdo) oxidation signals were diminished by incubation with varying concentrations of desloratadine, as determined by differential pulse voltammetry (DPV). This change was ascribed to desloratadine's binding mechanism to ct-dsDNA. The binding constant (Kb) between desloratadine and ct-dsDNA was determined to be 2.2 × 105 M−1 throughout electrochemical experiments. In order to further develop our comprehension of the interaction mechanism between desloratadine and ct-dsDNA, a series of spectroscopic experiments and molecular docking simulations were conducted. The Kb value was found to be 8.85 × 104 M−1 at a temperature of 25 °C by the use of fluorescence spectroscopic techniques. In summary, the utilization of electrochemical and spectroscopic techniques, alongside molecular docking investigations, has led to the prediction that desloratadine has the capability to interact with ct-dsDNA by groove binding.

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来源期刊
Analytical biochemistry
Analytical biochemistry 生物-分析化学
CiteScore
5.70
自引率
0.00%
发文量
283
审稿时长
44 days
期刊介绍: The journal''s title Analytical Biochemistry: Methods in the Biological Sciences declares its broad scope: methods for the basic biological sciences that include biochemistry, molecular genetics, cell biology, proteomics, immunology, bioinformatics and wherever the frontiers of research take the field. The emphasis is on methods from the strictly analytical to the more preparative that would include novel approaches to protein purification as well as improvements in cell and organ culture. The actual techniques are equally inclusive ranging from aptamers to zymology. The journal has been particularly active in: -Analytical techniques for biological molecules- Aptamer selection and utilization- Biosensors- Chromatography- Cloning, sequencing and mutagenesis- Electrochemical methods- Electrophoresis- Enzyme characterization methods- Immunological approaches- Mass spectrometry of proteins and nucleic acids- Metabolomics- Nano level techniques- Optical spectroscopy in all its forms. The journal is reluctant to include most drug and strictly clinical studies as there are more suitable publication platforms for these types of papers.
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