综合泛癌症基因组分析揭示了 SLC30A5 在肝细胞癌的增殖、转移和预后中的作用。

IF 4.3 3区 材料科学 Q1 ENGINEERING, ELECTRICAL & ELECTRONIC
ACS Applied Electronic Materials Pub Date : 2024-07-02 eCollection Date: 2024-01-01 DOI:10.7150/jca.97214
Yihan Liu, Tong Lu, Runze Li, Long Cui, Rui Xu, Shenyi Teng, Denis Baranenko, Tianze Zhang, Lida Yang, Rui Qie, Dan Xiao
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引用次数: 0

摘要

背景:SLC30A5是溶质转运蛋白家族的成员,与肿瘤发生和癌症进展有关。本研究旨在探讨 SLC30A 家族基因在泛癌症中的表达及预后意义,尤其关注 SLC30A5 在肝细胞癌(HCC)中的表达。研究方法评估了 33 种癌症类型(尤其是 HCC)中 SLC30A 家族基因的表达模式和预后意义。共表达分析探讨了 SLC30A5 与免疫细胞浸润、免疫检查点、与肿瘤血管生成和上皮-间质转化(EMT)相关的通路分子之间的关系。通过体外和体内实验评估了SLC30A5在HCC中的作用,这些实验包括CCK8活力实验、EdU细胞增殖实验、集落形成实验、细胞凋亡实验、伤口愈合实验、跨孔迁移实验,以及使用靶向敲除SLC30A5的Huh7细胞进行的异种移植小鼠模型试验。结果SLC30A家族基因在多种肿瘤中均有过表达。在 HCC 中,SLC30A5 的表达上调与不良预后相关。SLC30A5的表达与免疫细胞浸润、免疫检查点、血管生成相关分子和EMT之间存在显著关联。SLC30A5的过表达与疾病晚期、组织学分级较高和血管侵犯有关。单细胞 RNA 测序数据(GSE112271)显示恶性细胞中有显著的 SLC30A5 表达。体外和体内试验表明,在 Huh7 细胞中敲除 SLC30A5 可减少增殖、迁移和侵袭,同时促进细胞凋亡。结论本研究强调了 SLC30A5 在 HCC 中的临床意义,强调了它在细胞增殖和迁移中的作用。SLC30A5有望成为HCC的预后标志物和潜在靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Integrated pan-cancer genomic analysis reveals the role of SLC30A5 in the proliferation, metastasis, and prognosis of hepatocellular carcinoma.

Background: SLC30A5, a member of the solute transporter protein family, is implicated in tumorigenesis and cancer progression. This study aimed to explore the expression and prognostic significance of SLC30A family genes in pan-cancer, with a specific emphasis on SLC30A5 in hepatocellular carcinoma (HCC). Methods: Expression patterns and prognostic implications of SLC30A family genes were assessed across 33 cancer types, especially HCC. Co-expression analysis explored the relationship between SLC30A5 and immune cell infiltration, immune checkpoints, pathway molecules related to tumor angiogenesis and epithelial-mesenchymal transition (EMT). The role of SLC30A5 in HCC was evaluated through in vitro and in vivo assays, including CCK8 viability assay, EdU cell proliferation assay, colony formation assay, apoptosis assay, wound healing assay, transwell migration assay, and xenograft mouse model assay using Huh7 cells with targeted knockdown of SLC30A5. Results: SLC30A family genes exhibited overexpression in various tumors. In HCC, upregulation of SLC30A5 expression correlated with adverse prognosis. Significant associations were observed between SLC30A5 expression and immune cell infiltration, immune checkpoints, molecules involved in angiogenesis, and EMT. SLC30A5 overexpression was associated with advanced disease stages, higher histological grades, and vascular invasion. Single-cell RNA sequencing data (GSE112271) revealed notable SLC30A5 expression in malignant cells. In vitro and in vivo assays demonstrated that SLC30A5 knockdown in Huh7 cells reduced proliferation, migration, and invasion while promoting apoptosis. Conclusions: This study highlights the clinical relevance of SLC30A5 in HCC, emphasizing its role in cell proliferation and migration. SLC30A5 emerges as a promising candidate for a prognostic marker and a potential target in HCC.

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CiteScore
7.20
自引率
4.30%
发文量
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