用机器学习算法预测北印度人群中抗癫痫药物的疗效

IF 2 4区 医学 Q3 CLINICAL NEUROLOGY
Mahima Kaushik , Siddhartha Mahajan , Nitin Machahary , Sarita Thakran , Saransh Chopra , Raj Vardhan Tomar , Suman S. Kushwaha , Rachna Agarwal , Sangeeta Sharma , Ritushree Kukreti , Bibhu Biswal
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引用次数: 0

摘要

目的 本研究旨在利用有监督的机器学习技术开发一种分类器,以有效评估临床、人口统计学和生化因素对准确预测癫痫患者(PWE)抗癫痫药物(ASMs)治疗反应的影响。在为期一年的时间里,分别于第 2、4、8 和 12 个月对患者进行了随访,以了解他们服用的药物及其剂量、血清药物水平、癫痫发作控制频率、药物疗效、药物不良反应 (ADR) 以及对 ASM 的依从性。我们选择了一些特征,包括人口统计学细节、病史和脑电图(EEG)或计算机断层扫描(CT)等辅助检查,以区分不同缓解结果的患者。根据患者在研究期间的癫痫发作次数,缓解结果被分为 "良好反应者(GR)"和 "不良反应者(PR)"。我们利用数据集训练了七种经典的机器学习算法,即极端梯度提升(XGB)、K-近邻(KNN)、支持向量分类器(SVC)、决策树(DT)、随机森林(RF)、奈夫贝叶斯(NB)和逻辑回归(LR),以构建分类模型。结果我们的研究结果表明:1)在所研究的七种算法中,XGB 和 SVC 对 ASM 治疗结果的预测性能优越,在区分 PR 和 GR 患者方面,准确率分别为 0.66,ROC-AUC 得分为 0.67(XGB)和 0.66(SVC)。2) 对区分 PR 和 GR 患者影响最大的因素是癫痫发作家族史(无)、教育程度(识字)和多种疗法,Chi-square(χ2)值分别为 12.1539、8.7232 和 13.620,几率比(OR)分别为 2.2671、0.4467 和 1.9453。3).此外,我们的代用分析表明,XGB 和 SVC 的零假设在 100% 置信度下均被拒绝,这突显了其预测性能的重要性。利用基于 XG Boost 和 SVC 的机器学习分类器,我们成功预测了患者对 ASM 治疗做出反应的可能性,并在完成标准癫痫检查后将患者分为 PR 或 GR 两类。该分类器的预测结果具有统计学意义,表明其在改进治疗策略方面具有潜在的实用性,尤其是在为癫痫患者个性化选择 ASM 治疗方案方面。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Predicting efficacy of antiseizure medication treatment with machine learning algorithms in North Indian population

Purpose

This study aimed to develop a classifier using supervised machine learning to effectively assess the impact of clinical, demographical, and biochemical factors in accurately predicting the antiseizure medications (ASMs) treatment response in people with epilepsy (PWE).

Methods

Data was collected from 786 PWE at the Outpatient Department of Neurology, Institute of Human Behavior and Allied Sciences (IHBAS), New Delhi, India from 2005 to 2015. Patients were followed up at the 2nd, 4th, 8th, and 12th month over the span of 1 year for the drugs being administered and their dosage, the serum drug levels, the frequency of seizure control, drug efficacy, the adverse drug reactions (ADRs), and their compliance to ASMs. Several features, including demographic details, medical history, and auxiliary examinations electroencephalogram (EEG) or Computed Tomography (CT) were chosen to discern between patients with distinct remission outcomes. Remission outcomes were categorized into ‘good responder (GR)’ and ‘poor responder (PR)’ based on the number of seizures experienced by the patients over the study duration. Our dataset was utilized to train seven classical machine learning algorithms i.e Extreme Gradient Boost (XGB), K-Nearest Neighbor (KNN), Support Vector Classifier (SVC), Decision Tree (DT), Random Forest (RF), Naïve Bayes (NB) and Logistic Regression (LR) to construct classification models.

Results

Our research findings indicate that 1) among the seven algorithms examined, XGB and SVC demonstrated superior predictive performances of ASM treatment outcomes with an accuracy of 0.66 each and ROC-AUC scores of 0.67 (XGB) and 0.66 (SVC) in distinguishing between PR and GR patients. 2) The most influential factor in discerning PR to GR patients is a family history of seizures (no), education (literate) and multitherapy with Chi-square (χ2) values of 12.1539, 8.7232 and 13.620 respectively and odds ratio (OR) of 2.2671, 0.4467, and 1.9453 each. 3). Furthermore, our surrogate analysis revealed that the null hypothesis for both XGB and SVC was rejected at a 100 % confidence level, underscoring the significance of their predictive performance. These findings underscore the robustness and reliability of XGB and SVC in our predictive modelling framework.

Significance

Utilizing XG Boost and SVC-based machine learning classifier, we successfully forecasted the likelihood of a patient's response to ASM treatment, categorizing them as either PR or GR, post-completion of standard epilepsy examinations. The classifier’s predictions were found to be statistically significant, suggesting their potential utility in improving treatment strategies, particularly in the personalized selection of ASM regimens for individual epilepsy patients.

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来源期刊
Epilepsy Research
Epilepsy Research 医学-临床神经学
CiteScore
0.10
自引率
4.50%
发文量
143
审稿时长
62 days
期刊介绍: Epilepsy Research provides for publication of high quality articles in both basic and clinical epilepsy research, with a special emphasis on translational research that ultimately relates to epilepsy as a human condition. The journal is intended to provide a forum for reporting the best and most rigorous epilepsy research from all disciplines ranging from biophysics and molecular biology to epidemiological and psychosocial research. As such the journal will publish original papers relevant to epilepsy from any scientific discipline and also studies of a multidisciplinary nature. Clinical and experimental research papers adopting fresh conceptual approaches to the study of epilepsy and its treatment are encouraged. The overriding criteria for publication are novelty, significant clinical or experimental relevance, and interest to a multidisciplinary audience in the broad arena of epilepsy. Review articles focused on any topic of epilepsy research will also be considered, but only if they present an exceptionally clear synthesis of current knowledge and future directions of a research area, based on a critical assessment of the available data or on hypotheses that are likely to stimulate more critical thinking and further advances in an area of epilepsy research.
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