地面激光扫描和低磁场数字化技术为 32 年树龄的松柏提供了相似的建筑粗根特征。

IF 4.7 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Antonio Montagnoli, Andrew T Hudak, Pasi Raumonen, Bruno Lasserre, Mattia Terzaghi, Carlos A Silva, Benjamin C Bright, Lee A Vierling, Bruna N de Vasconcellos, Donato Chiatante, R Kasten Dumroese
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引用次数: 0

摘要

背景:了解树木如何发展根系对于理解野外和城市森林生态系统如何对采伐、火灾和气候变化等干扰做出弹性响应至关重要。内源决定的根系特征与对环境刺激的反应之间的相互作用导致树木对生物和非生物因素的适应,影响稳定性、碳分配和养分吸收。将根系的三维结构与根系形态特征信息相结合,有助于深入了解根系的功能和适应可塑性。低磁场数字化与 AMAPmod(植物根系结构建模)软件相结合,一直是描述根系结构和提供粗根性状可靠测量值的最佳方法,但数据收集的速度和规模仍然困难重重。与地面激光扫描(TLS)相关的仪器和应用已经取得了显著进展,如果与定量结构模型(QSM)结合使用,将显示出对树木根系进行稳健测量的一些潜力。在这里,我们通过分析 32 年树龄的松柏根系,首次对这两种方法进行了比较:一般来说,在根系总体水平和根序等级方面,这两种方法得出的根系特征值在体积、长度和数量方面具有可比性。每种根系性状的 QSM 对根系大小(即输入参数 PatchDiam)高度敏感,当为每种性状指定离散的 PatchDiam 范围时,模型得到了优化。在研究四个主要方向扇形的根时,我们观察到不同的方法在长度和数量上存在差异,这取决于根的顺序,而不是体积:我们认为,TLS 和 QSM 可以促进快速数据收集(也许是在原地),同时提供定量的准确性,特别是在总根系层面。如果希望对根系结构进行更详细的测量,TLS 方法将受益于在不同视角下的额外扫描,尽可能避免重力位移,同时通过人工对根系进行子取样,以校准和验证 QSM 模型。尽管存在一些尚未解决的后勤挑战,但我们的研究结果表明,未来使用 TLS 可以快速、可复制地量化树根系统结构。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Terrestrial laser scanning and low magnetic field digitization yield similar architectural coarse root traits for 32-year-old Pinus ponderosa trees.

Background: Understanding how trees develop their root systems is crucial for the comprehension of how wildland and urban forest ecosystems plastically respond to disturbances such as harvest, fire, and climate change. The interplay between the endogenously determined root traits and the response to environmental stimuli results in tree adaptations to biotic and abiotic factors, influencing stability, carbon allocation, and nutrient uptake. Combining the three-dimensional structure of the root system, with root morphological trait information promotes a robust understanding of root function and adaptation plasticity. Low Magnetic Field Digitization coupled with AMAPmod (botAnique et Modelisation de l'Architecture des Plantes) software has been the best-performing method for describing root system architecture and providing reliable measurements of coarse root traits, but the pace and scale of data collection remain difficult. Instrumentation and applications related to Terrestrial Laser Scanning (TLS) have advanced appreciably, and when coupled with Quantitative Structure Models (QSM), have shown some potential toward robust measurements of tree root systems. Here we compare, we believe for the first time, these two methodologies by analyzing the root system of 32-year-old Pinus ponderosa trees.

Results: In general, at the total root system level and by root-order class, both methods yielded comparable values for the root traits volume, length, and number. QSM for each root trait was highly sensitive to the root size (i.e., input parameter PatchDiam) and models were optimized when discrete PatchDiam ranges were specified for each trait. When examining roots in the four cardinal direction sectors, we observed differences between methodologies for length and number depending on root order but not volume.

Conclusions: We believe that TLS and QSM could facilitate rapid data collection, perhaps in situ, while providing quantitative accuracy, especially at the total root system level. If more detailed measures of root system architecture are desired, a TLS method would benefit from additional scans at differing perspectives, avoiding gravitational displacement to the extent possible, while subsampling roots by hand to calibrate and validate QSM models. Despite some unresolved logistical challenges, our results suggest that future use of TLS may hold promise for quantifying tree root system architecture in a rapid, replicable manner.

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来源期刊
Plant Methods
Plant Methods 生物-植物科学
CiteScore
9.20
自引率
3.90%
发文量
121
审稿时长
2 months
期刊介绍: Plant Methods is an open access, peer-reviewed, online journal for the plant research community that encompasses all aspects of technological innovation in the plant sciences. There is no doubt that we have entered an exciting new era in plant biology. The completion of the Arabidopsis genome sequence, and the rapid progress being made in other plant genomics projects are providing unparalleled opportunities for progress in all areas of plant science. Nevertheless, enormous challenges lie ahead if we are to understand the function of every gene in the genome, and how the individual parts work together to make the whole organism. Achieving these goals will require an unprecedented collaborative effort, combining high-throughput, system-wide technologies with more focused approaches that integrate traditional disciplines such as cell biology, biochemistry and molecular genetics. Technological innovation is probably the most important catalyst for progress in any scientific discipline. Plant Methods’ goal is to stimulate the development and adoption of new and improved techniques and research tools and, where appropriate, to promote consistency of methodologies for better integration of data from different laboratories.
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