基于网络药理学和分子对接的神七口服液抗癌症患者化疗诱导骨髓抑制的机制探索

IF 1.6 4区 医学 Q4 BIOCHEMICAL RESEARCH METHODS
Feng Wan, Qiao Zheng, Tiecheng Zhou, Hang Zhou, Fu Peng, Dejiao Yao, Cheng Peng
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引用次数: 0

摘要

背景神七口服液(SQG)可能对化疗引起的骨髓抑制(CIM)有益。然而,使用神七口服液治疗 CIM 的潜在机制仍然缺乏研究:方法:选取 27 例癌症患者的血液样本进行 RNA 序列分析,以获得差异表达基因(DEGs)。然后,获取 SQG 的活性成分和靶基因。接着,将药物靶点与 DEGs 进行交叉,得到交叉基因,然后进行功能富集分析,构建药物-化合物基因-疾病网络。随后,筛选出核心基因。然后,进行免疫细胞浸润、分子对接、药代动力学和毒性预测以及 RT-qPCR 分析:结果:共鉴定出 1 341 个 DEGs、51 个活性化合物和 264 个靶基因。然后,获得了 30 个交叉基因。接着,构建了药物-化合物-基因-疾病网络,并获得了 7 个核心基因。免疫浸润分析表明,CIM组中只有T滤泡辅助细胞显著增加,这与MAPK1、MAPK14、MCL1、PTEN和PTGS2显著负相关。叶黄素、槲皮素和β-谷甾醇与核心基因的亲和性更好。木犀草素和槲皮素符合利宾斯基的 "5 "法则,很可能会被胃肠系统吸收。毒性预测显示,木犀草素和槲皮素都不具有致癌性或肝毒性:结论:PTEN、PTGS2、CCL2、FOS、MCL1、MAPK1 和 MAPK14 被确定为 CIM 患者的核心基因,它们参与了 MAPK 和 PI3K-Akt 信号通路。木犀草素和槲皮素可能是治疗 CIM 的有效药物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Exploring the Mechanism of Shen Qi Gui Oral Liquid against Chemotherapy-Induced Myelosuppression in Cancer Patients Based on Network Pharmacology and Molecular Docking.

Background: Shen Qi Gui oral liquid (SQG) may be beneficial for chemotherapyinduced myelosuppression (CIM). However, the underlying mechanism of CIM treated with SQG is still lacking.

Methods: A total of 27 blood samples from cancer patients were selected to perform RNA-seq to obtain the Differentially Expressed Genes (DEGs). Then, the active components and target genes of SQG were acquired. Next, the drug targets and DEGs were intersected to obtain the intersection genes, followed by functional enrichment analysis and construction of a drug-compoundgene- disease network. Subsequently, core genes were selected. Then, immune cell infiltration, molecular docking, pharmacokinetic and toxicity prediction, and RT-qPCR were performed.

Results: A total of 1,341 DEGs, 51 active compounds, and 264 target genes were identified. Then, 30 intersection genes were acquired. Next, a drug-compound-gene-disease network was constructed, and 7 core genes were acquired. Immune infiltration analysis exhibited that only T follicular helper cells were significantly increased in the CIM group, which was significantly negatively correlated with MAPK1, MAPK14, MCL1, PTEN, and PTGS2. The luteolin, quercetin, and beta-sitosterol showed better affinity with core genes. Luteolin and quercetin, which satisfied Lipinski's rule of five, were likely absorbed by the gastrointestinal system. Toxicity predictions showed that neither luteolin nor quercetin exhibited carcinogenicity or hepatotoxicity.

Conclusion: PTEN, PTGS2, CCL2, FOS, MCL1, MAPK1, and MAPK14 were identified as the core genes in CIM patients, which were involved in the MAPK and PI3K-Akt signaling pathways. Luteolin and quercetin may be the promising drugs against CIM.

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来源期刊
CiteScore
3.10
自引率
5.60%
发文量
327
审稿时长
7.5 months
期刊介绍: Combinatorial Chemistry & High Throughput Screening (CCHTS) publishes full length original research articles and reviews/mini-reviews dealing with various topics related to chemical biology (High Throughput Screening, Combinatorial Chemistry, Chemoinformatics, Laboratory Automation and Compound management) in advancing drug discovery research. Original research articles and reviews in the following areas are of special interest to the readers of this journal: Target identification and validation Assay design, development, miniaturization and comparison High throughput/high content/in silico screening and associated technologies Label-free detection technologies and applications Stem cell technologies Biomarkers ADMET/PK/PD methodologies and screening Probe discovery and development, hit to lead optimization Combinatorial chemistry (e.g. small molecules, peptide, nucleic acid or phage display libraries) Chemical library design and chemical diversity Chemo/bio-informatics, data mining Compound management Pharmacognosy Natural Products Research (Chemistry, Biology and Pharmacology of Natural Products) Natural Product Analytical Studies Bipharmaceutical studies of Natural products Drug repurposing Data management and statistical analysis Laboratory automation, robotics, microfluidics, signal detection technologies Current & Future Institutional Research Profile Technology transfer, legal and licensing issues Patents.
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