根据数据推导出连接血管内皮生长因子受体(VEGFR)、内分泌紊乱和动脉粥样硬化的不良后果途径。

IF 4.5 2区 医学 Q2 MEDICINE, RESEARCH & EXPERIMENTAL
Altex-Alternatives To Animal Experimentation Pub Date : 2024-01-01 Epub Date: 2024-07-08 DOI:10.14573/altex.2403211
Daniel Ehrlich, Shagun Krishna, Nicole Kleinstreuer
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引用次数: 0

摘要

血管内皮生长因子(VEGF)及其受体(VEGFR)的失调导致动脉粥样硬化和心血管疾病(CVD),使其成为心血管疾病风险评估的潜在目标。高通量筛选(HTS)方法产生了大量体外数据,提供了有助于评估化学毒性和确定不良后果途径(AOPs)的分子诱发事件(MIEs)的机理信息。AOPs 代表了导致毒性的生物反应的逻辑顺序,是为化学品风险评估提供信息的宝贵工具。在此,我们利用 HTS 数据制定了一个将血管内皮生长因子信号干扰与动脉粥样硬化联系起来的 AOP。通过评估 ToxCast、Tox21 和 PubChem 数据,我们获得了 4165 种在针对血管内皮生长因子受体的检测中具有活性的化合物的生物特征。化学信息学分析确定了 109 个富集结构指纹。应用基于化学结构生物活性的子空间聚类方法得出了 12 个主要靶点,这些靶点与心血管疾病的相关性通过人工智能辅助文献综述得到了证实。通过将 HTS 数据强调的机理关系与文献综述结果相结合,假设了一个 AOP,将羟色胺受体 (HTR)、雌激素受体 Alpha (ERα) 和血管加压素受体 (AVPR) 目标与血管内皮生长因子受体活性、血管生成信号和动脉粥样硬化联系起来。一些干扰内分泌的化学物质(EDCs),如双酚、三氯生、二氯二苯三氯乙烷(DDT)和多氯联苯(PCBs),被确定为相关的化学压力源。这些化学品的子空间聚类评估了潜在的 MIEs,并强调了与使用情况类别的关联。通过应用计算方法对 HTS 数据进行剖析并假设机理 AOP,本研究提出了一种数据驱动的环境心脏毒性评估方法,该方法最终可以补充并减少毒理学评估中对动物试验的需求。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Data-driven derivation of an adverse outcome pathway linking vascular endothelial growth factor receptor (VEGFR), endocrine disruption, and atherosclerosis.

Dysregulation of vascular endothelial growth factor (VEGF) and its receptor (VEGFR) contributes to atherosclerosis and cardiovascular disease (CVD), making it a potential target for CVD risk assessment. High-throughput screening (HTS) approaches have resulted in large-scale in vitro data, providing mechanistic information that can help assess chemical toxicity and identify molecular ini­tiating events (MIEs) of adverse outcome pathways (AOPs). AOPs represent a logical sequence of biological responses contributing to toxicity and are valuable tools to inform chemical risk assessment. Here, we used HTS data to formulate an AOP relating VEGF signaling perturbation to atheroscle­rosis. ToxCast, Tox21, and PubChem data were evaluated to obtain bioprofiles of 4165 compounds active in assays targeting VEGFR. Cheminformatics analysis identified 109 enriched structural fin­gerprints. Applying a subspace clustering approach based on chemical structure bioactivity yielded 12 primary targets, whose relevance to CVD was confirmed by an AI-assisted literature review. An AOP was hypothesized by coupling mechanistic relationships highlighted by HTS data with literature review findings, linking serotonin receptor (HTR), estrogen receptor alpha (ERα), and vasopressin receptor (AVPR) targets with VEGFR activity, angiogenic signaling, and atherosclerosis. Several endocrine disrupting chemicals (EDCs), e.g., bisphenols, triclosan, dichlorodiphenyltrichloroethane (DDT), and polychlorinated biphenyls (PCBs), were identified as relevant chemical stressors. Sub­space clustering of these chemicals evaluated potential MIEs and highlighted associations with use case classes. By applying computational methods to profile HTS data and hypothesize a mechanistic AOP, this study proposes a data-driven approach to evaluating environmental cardiotoxicity, which could eventually supplement and reduce the need for animal testing in toxicological assessments.

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来源期刊
Altex-Alternatives To Animal Experimentation
Altex-Alternatives To Animal Experimentation MEDICINE, RESEARCH & EXPERIMENTAL-
CiteScore
7.70
自引率
8.90%
发文量
89
审稿时长
2 months
期刊介绍: ALTEX publishes original articles, short communications, reviews, as well as news and comments and meeting reports. Manuscripts submitted to ALTEX are evaluated by two expert reviewers. The evaluation takes into account the scientific merit of a manuscript and its contribution to animal welfare and the 3R principle.
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