心脏蛋白质组分析发现 MYH6 和 COX5B 是不明原因猝死的生物标志物

IF 2.2 3区 医学 Q1 MEDICINE, LEGAL
Ziyan Song , Wensi Bian , Junyi Lin , Yadong Guo , Weibo Shi , Hang Meng , Yuanyuan Chen , Molin Zhang , Zheng Liu , Zijie Lin , Kaijun Ma , Liliang Li
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引用次数: 0

摘要

原因不明的猝死(SUD)在法医病理学中并不少见。然而,由于缺乏特异性生物标志物,诊断不明原因死亡仍具有挑战性。本研究旨在筛选差异表达蛋白(DEPs),并验证其作为 SUD 病例诊断生物标志物的有用性。我们设计了一个三阶段调查,在发现阶段,通过对死于 SUD、机械损伤和一氧化碳(CO)中毒的病例进行无标记蛋白质组分析,筛选福尔马林固定石蜡包埋(FFPE)心脏标本。经过严格的标准筛选,共有26种蛋白质被确定为SUD病例的DEPs。生物信息学和 Adaboost-递归特征消除(RFE)分析进一步揭示了这 26 个蛋白质中的三个(MYH6、COX5B 和 TNNT2)是潜在的判别生物标志物。在训练阶段,与一系列对照病例(n = 42)相比,MYH6 和 COX5B 在 29 个独立 SUD 病例的心脏组织中被证实为真正的 DEPs。接收者操作特征(ROC)分析表明,MYH6和COX5B的组合达到了最佳的诊断灵敏度(89.7%)和特异度(84.4%),曲线下面积(AUC)为0.91。随后,根据训练阶段得出的逻辑回归公式构建了一个诊断软件。在验证阶段,诊断软件被应用于 8 个真实的 SUD 病例,其中 7 个(87.5%)被准确识别。我们的研究通过整合心脏 MYH6 和 COX5B 作为双重诊断生物标志物,为 SUD 的实际诊断提供了一种有效的策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Heart proteomic profiling discovers MYH6 and COX5B as biomarkers for sudden unexplained death

Sudden unexplained death (SUD) is not uncommon in forensic pathology. Yet, diagnosis of SUD remains challenging due to lack of specific biomarkers. This study aimed to screen differentially expressed proteins (DEPs) and validate their usefulness as diagnostic biomarkers for SUD cases. We designed a three-phase investigation, where in the discovery phase, formalin-fixed paraffin-embedded (FFPE) heart specimens were screened through label-free proteomic analysis of cases dying from SUD, mechanical injury and carbon monoxide (CO) intoxication. A total of 26 proteins were identified to be DEPs for the SUD cases after rigorous criterion. Bioinformatics and Adaboost-recursive feature elimination (RFE) analysis further revealed that three of the 26 proteins (MYH6, COX5B and TNNT2) were potential discriminative biomarkers. In the training phase, MYH6 and COX5B were verified to be true DEPs in cardiac tissues from 29 independent SUD cases as compared with a serial of control cases (n = 42). Receiver operating characteristic (ROC) analysis illustrated that combination of MYH6 and COX5B achieved optimal diagnostic sensitivity (89.7 %) and specificity (84.4 %), with area under the curve (AUC) being 0.91. A diagnostic software based on the logistic regression formula derived from the training phase was then constructed. In the validation phase, the diagnostic software was applied to eight authentic SUD cases, seven (87.5 %) of which were accurately recognized. Our study provides a valid strategy towards practical diagnosis of SUD by integrating cardiac MYH6 and COX5B as dual diagnostic biomarkers.

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来源期刊
Forensic science international
Forensic science international 医学-医学:法
CiteScore
5.00
自引率
9.10%
发文量
285
审稿时长
49 days
期刊介绍: Forensic Science International is the flagship journal in the prestigious Forensic Science International family, publishing the most innovative, cutting-edge, and influential contributions across the forensic sciences. Fields include: forensic pathology and histochemistry, chemistry, biochemistry and toxicology, biology, serology, odontology, psychiatry, anthropology, digital forensics, the physical sciences, firearms, and document examination, as well as investigations of value to public health in its broadest sense, and the important marginal area where science and medicine interact with the law. The journal publishes: Case Reports Commentaries Letters to the Editor Original Research Papers (Regular Papers) Rapid Communications Review Articles Technical Notes.
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