斑鸠壳研究植物中带有凝集素结构域的蛋白质进化的模型

IF 1.1 4区 生物学 Q3 PLANT SCIENCES
A. R. Aglyamova, A. R. Khakimova, O. V. Gorshkov, T. A. Gorshkova
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引用次数: 0

摘要

摘要青苔Physcomitrium (formerly Physcomitrella) patens (Hedw.) Mitt.是一种已破译基因组的无籽维管束植物,是陆生植物中最古老类群的代表,也是研究植物进化发展的便捷模型。为了研究植物进化过程中碳水化合物结合蛋白的形成和功能,我们在全基因组范围内对青苔(P. patens)基因组中编码凝集素结构域蛋白的基因进行了筛选,并分析了这些基因在青苔不同细胞和组织中的表达情况。我们发现了来自 15 个科的 141 个编码蛋白质的基因,其代表基因的集合和数量与之前分析的被子植物有很大不同。在青苔中,一些具有凝集素结构域的蛋白质具有高等种子植物所没有的特定结构域结构。根据基因在苔藓不同组织中的表达水平进行的基因聚类显示,具有凝集素结构域的蛋白质基因有三种表达模式,其中第三种聚类出现在具有顶端生长类型的细胞中(在花叶苔、绿苔和苔藓根茎中),其特点是活跃表达的基因数量最多。研究结果支持这样一种观点,即植物中很早就出现了编码凝集素的基因,随着植物组织的复杂性不断增加,具有凝集素结构域的蛋白质家族也在进一步扩大。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Physcomitrium patens: A Model for Studying the Evolution of Proteins with Lectin Domains in Plants

Physcomitrium patens: A Model for Studying the Evolution of Proteins with Lectin Domains in Plants

Abstract

Moss Physcomitrium (formerly Physcomitrella) patens (Hedw.) Mitt. is a seedless vascular plant with a deciphered genome, a representative of the most ancient living taxa of land plants, and a convenient model for studying the evolutionary development of plants. In order to study the formation and functions of carbohydrate-binding proteins in plants during evolution, a genome-wide screening of genes encoding proteins with lectin domains in the P. patens genome was carried out, and their expression in various cells and tissues of moss was analyzed. We identified 141 genes encoding proteins from 15 families, the set and number of representatives of which differed significantly from the earlier analyzed angiosperms. In P. patens, some of the proteins with lectin domains had a specific domain architecture absent in higher seed plants. Clustering of genes according to their level of expression in various tissues of moss showed three patterns of expression of genes for proteins with lectin domains, of which the third cluster, presented in cells with a tip growth type (in caulonema, chloronema, and moss rhizoids), was characterized by the largest number of actively expressed genes. The results obtained support the idea of the early appearance of genes encoding lectins in plants and the further expansion of families of proteins with lectin domains with increasing complexity of plant organization.

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来源期刊
CiteScore
4.00
自引率
14.30%
发文量
107
审稿时长
6 months
期刊介绍: Russian Journal of Plant Physiology is a leading journal in phytophysiology. It embraces the full spectrum of plant physiology and brings together the related aspects of biophysics, biochemistry, cytology, anatomy, genetics, etc. The journal publishes experimental and theoretical articles, reviews, short communications, and descriptions of new methods. Some issues cover special problems of plant physiology, thus presenting collections of articles and providing information in rapidly growing fields. The editorial board is highly interested in publishing research from all countries and accepts manuscripts in English.
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