借助基因组数据挖掘破解电离辐射诱发眼损伤的分子图谱。

IF 1.7 4区 医学 Q3 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH
Katarina Baralić, Predrag Božović, Danijela Đukić-Ćosić
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引用次数: 0

摘要

即使电离辐射水平很低,也会对眼睛造成伤害。然而,人们尚未完全了解其潜在的分子机制。我们的目标是采用全面的硅学方法来解决这一问题。为此,我们利用比较毒物基因组学数据库(CTD)、ToppGene Suite、Cytoscape、GeneMANIA 和 Metascape 来鉴定与辐射诱导眼损伤相关的六个关键调控基因(ATM、CRYAB、SIRT1、TGFB1、TREX1 和 YAP1),所有这些基因都有物理相互作用。一些已确定的分子功能围绕 DNA 修复机制,而另一些则涉及蛋白质结合、酶活性、代谢过程和蛋白质翻译后修饰。生物过程主要集中在对 DNA 损伤的反应上,尤其是 p53 信号通路。我们发现了几种 miRNA(如 hsa-miR-183 和 hsamiR-589)在电离辐射诱发眼损伤的机制中的重要作用。我们的研究为深入了解辐照的不良影响提供了一种有价值的方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Deciphering the molecular landscape of ionising radiation-induced eye damage with the help of genomic data mining.

Even at low levels, exposure to ionising radiation can lead to eye damage. However, the underlying molecular mechanisms are not yet fully understood. We aimed to address this gap with a comprehensive in silico approach to the issue. For this purpose we relied on the Comparative Toxicogenomics Database (CTD), ToppGene Suite, Cytoscape, GeneMANIA, and Metascape to identify six key regulator genes associated with radiation-induced eye damage (ATM, CRYAB, SIRT1, TGFB1, TREX1, and YAP1), all of which have physical interactions. Some of the identified molecular functions revolve around DNA repair mechanisms, while others are involved in protein binding, enzymatic activities, metabolic processes, and post-translational protein modifications. The biological processes are mostly centred on response to DNA damage, the p53 signalling pathway in particular. We identified a significant role of several miRNAs, such as hsa-miR-183 and hsamiR-589, in the mechanisms behind ionising radiation-induced eye injuries. Our study offers a valuable method for gaining deeper insights into the adverse effects of radiation exposure.

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来源期刊
Arhiv Za Higijenu Rada I Toksikologiju-Archives of Industrial Hygiene and Toxicology
Arhiv Za Higijenu Rada I Toksikologiju-Archives of Industrial Hygiene and Toxicology PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH-TOXICOLOGY
CiteScore
3.50
自引率
4.80%
发文量
26
审稿时长
6-12 weeks
期刊介绍: Archives of Industrial Hygiene and Toxicology (abbr. Arh Hig Rada Toksikol) is a peer-reviewed biomedical scientific quarterly that publishes contributions relevant to all aspects of environmental and occupational health and toxicology.
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