慢性阻塞性肺病肺癌患者循环 RNA 的差异表达谱和功能预测:一项试点研究。

IF 1.3 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Xiaoou Li, Yongchun Shen, Jiahan Cheng, Jun Chen, Zhicheng Yuan, Tao Wang, Lei Chen, Lunxu Liu, Fuqiang Wen
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引用次数: 0

摘要

以肺气肿(E)和慢性支气管炎(CB)等临床亚型为特征的慢性阻塞性肺疾病(COPD)与肺癌(LC)的高风险相关。本研究旨在评估循环RNA的表达模式及其在慢性阻塞性肺病肺癌患者中的潜在功能参与。研究使用 circRNA 微阵列来描述差异表达的 circRNAs(DEcircRNAs)谱。在 CB vs. LC 患者(Con)、E vs. Con、E vs. CB 和 CBE vs. Con 的比较中,分别鉴定出了 176、240、163 和 243 个 DEcircRNAs。所有比较组中的 DEcircRNAs 主要与免疫相关的 GO 术语有关,并且也富集于免疫和炎症通路中。共有 49 个 DEcircRNA 与多种免疫细胞的浸润显著相关。其中,hsa-MROH9_0001 和 hsa-RP11-35J10_0013 分别与浆细胞和 T 细胞 CD4 记忆静息细胞呈正相关和负相关;这两个 DEcircRNA 海绵 miRNA 具有良好的诊断性能。WGCNA 发现了与 CB 进展相关的六个关键 circRNA。RT-qPCR证实了hsa-MROH9_0001和circRNA_21729在E组和CB组的表达模式。总之,我们报告了循环RNA图谱,研究结果表明,hsa-MROH9_0001和circRNA_21729可能是慢性阻塞性肺病患者的潜在治疗靶点。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Differential expression profiles and functional prediction of circular RNAs in lung cancer patients with chronic obstructive pulmonary disease: a pilot study.

Chronic obstructive pulmonary disease (COPD), characterized by clinical sub-phenotypes such as emphysema (E) and chronic bronchitis (CB), is associated with a greater risk of lung cancer (LC). This study aimed to assess the expression patterns of circRNA and their potential functional involvement in LC patients with COPD. A circRNA microarray was used to characterize differentially expressed circRNAs (DEcircRNAs) profiles. A total of 176, 240, 163, and 243 DEcircRNAs were identified in comparisons between CB vs. LC patients (Con), E vs. Con, E vs. CB, and CBE vs. Con, respectively. DEcircRNAs in all comparison groups were primarily associated with immune-related GO terms and were also enriched in immune and inflammatory pathways. In total, 49 DEcircRNAs were significantly correlated with the infiltration of multiple immune cells. Among them, hsa-MROH9_0001 and hsa-RP11-35J10_0013 were positively and negatively correlated with plasma cells and T-cell CD4 memory resting cells, respectively; these two DEcircRNA-sponged miRNAs have good diagnostic performance. WGCNA identified six key circRNAs associated with CB progression. The expression patterns of hsa-MROH9_0001 and circRNA_21729 in E and CB groups were confirmed by RT-qPCR. In conclusion, we reported circRNA profiles and the findings demonstrated that hsa-MROH9_0001 and circRNA_21729 may be potential therapeutic targets for LC with COPD.

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来源期刊
General physiology and biophysics
General physiology and biophysics 生物-生化与分子生物学
CiteScore
2.70
自引率
0.00%
发文量
42
审稿时长
6-12 weeks
期刊介绍: General Physiology and Biophysics is devoted to the publication of original research papers concerned with general physiology, biophysics and biochemistry at the cellular and molecular level and is published quarterly by the Institute of Molecular Physiology and Genetics, Slovak Academy of Sciences.
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