Shan Li , Shuangshuang Luo , Xinran Yin , Xingying Zhao , Xuyang Wang , Song Gao , Sha Xu , Jian Lu , Jingwen Zhou
{"title":"筛选ent-copalyl二磷酸合成酶和代谢工程,在酿酒酵母中实现ent-copalol的从头生物合成","authors":"Shan Li , Shuangshuang Luo , Xinran Yin , Xingying Zhao , Xuyang Wang , Song Gao , Sha Xu , Jian Lu , Jingwen Zhou","doi":"10.1016/j.synbio.2024.06.005","DOIUrl":null,"url":null,"abstract":"<div><p>The diterpene <em>ent</em>-copalol is an important precursor to the synthesis of andrographolide and is found only in green chiretta <em>(Andrographis paniculata)</em>. <em>De novo</em> biosynthesis of <em>ent</em>-copalol has not been reported, because the catalytic activity of <em>ent</em>-copalyl diphosphate synthase (CPS) is very low in microorganisms. In order to achieve the biosynthesis of <em>ent</em>-copalol, <em>Saccharomyces cerevisiae</em> was selected as the chassis strain, because its endogenous mevalonate pathway and dephosphorylases could provide natural promotion for the synthesis of <em>ent</em>-copalol. The strain capable of synthesizing diterpene geranylgeranyl pyrophosphate was constructed by strengthening the mevalonate pathway genes and weakening the competing pathway. Five full-length <em>Ap</em>CPSs were screened by transcriptome sequencing of <em>A. paniculata</em> and <em>Ap</em>CPS2 had the best activity and produced <em>ent</em>-CPP exclusively. The peak area of <em>ent</em>-copalol was increased after the <em>Ap</em>CPS2 saturation mutation and its configuration was determined by NMR and ESI-MS detection. By appropriately optimizing acetyl-CoA supply and fusion-expressing key enzymes, 35.6 mg/L <em>ent</em>-copalol was generated. In this study, <em>de novo</em> biosynthesis and identification of <em>ent</em>-copalol were achieved and the highest titer ever reported. It provides a platform strain for the further pathway analysis of andrographolide and derivatives and provides a reference for the synthesis of other pharmaceutical intermediates.</p></div>","PeriodicalId":22148,"journal":{"name":"Synthetic and Systems Biotechnology","volume":null,"pages":null},"PeriodicalIF":4.4000,"publicationDate":"2024-06-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2405805X24000942/pdfft?md5=d092e35682132d8845904ea2be622283&pid=1-s2.0-S2405805X24000942-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Screening of ent-copalyl diphosphate synthase and metabolic engineering to achieve de novo biosynthesis of ent-copalol in Saccharomyces cerevisiae\",\"authors\":\"Shan Li , Shuangshuang Luo , Xinran Yin , Xingying Zhao , Xuyang Wang , Song Gao , Sha Xu , Jian Lu , Jingwen Zhou\",\"doi\":\"10.1016/j.synbio.2024.06.005\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The diterpene <em>ent</em>-copalol is an important precursor to the synthesis of andrographolide and is found only in green chiretta <em>(Andrographis paniculata)</em>. <em>De novo</em> biosynthesis of <em>ent</em>-copalol has not been reported, because the catalytic activity of <em>ent</em>-copalyl diphosphate synthase (CPS) is very low in microorganisms. In order to achieve the biosynthesis of <em>ent</em>-copalol, <em>Saccharomyces cerevisiae</em> was selected as the chassis strain, because its endogenous mevalonate pathway and dephosphorylases could provide natural promotion for the synthesis of <em>ent</em>-copalol. The strain capable of synthesizing diterpene geranylgeranyl pyrophosphate was constructed by strengthening the mevalonate pathway genes and weakening the competing pathway. Five full-length <em>Ap</em>CPSs were screened by transcriptome sequencing of <em>A. paniculata</em> and <em>Ap</em>CPS2 had the best activity and produced <em>ent</em>-CPP exclusively. The peak area of <em>ent</em>-copalol was increased after the <em>Ap</em>CPS2 saturation mutation and its configuration was determined by NMR and ESI-MS detection. By appropriately optimizing acetyl-CoA supply and fusion-expressing key enzymes, 35.6 mg/L <em>ent</em>-copalol was generated. In this study, <em>de novo</em> biosynthesis and identification of <em>ent</em>-copalol were achieved and the highest titer ever reported. It provides a platform strain for the further pathway analysis of andrographolide and derivatives and provides a reference for the synthesis of other pharmaceutical intermediates.</p></div>\",\"PeriodicalId\":22148,\"journal\":{\"name\":\"Synthetic and Systems Biotechnology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.4000,\"publicationDate\":\"2024-06-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S2405805X24000942/pdfft?md5=d092e35682132d8845904ea2be622283&pid=1-s2.0-S2405805X24000942-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Synthetic and Systems Biotechnology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2405805X24000942\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Synthetic and Systems Biotechnology","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2405805X24000942","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
Screening of ent-copalyl diphosphate synthase and metabolic engineering to achieve de novo biosynthesis of ent-copalol in Saccharomyces cerevisiae
The diterpene ent-copalol is an important precursor to the synthesis of andrographolide and is found only in green chiretta (Andrographis paniculata). De novo biosynthesis of ent-copalol has not been reported, because the catalytic activity of ent-copalyl diphosphate synthase (CPS) is very low in microorganisms. In order to achieve the biosynthesis of ent-copalol, Saccharomyces cerevisiae was selected as the chassis strain, because its endogenous mevalonate pathway and dephosphorylases could provide natural promotion for the synthesis of ent-copalol. The strain capable of synthesizing diterpene geranylgeranyl pyrophosphate was constructed by strengthening the mevalonate pathway genes and weakening the competing pathway. Five full-length ApCPSs were screened by transcriptome sequencing of A. paniculata and ApCPS2 had the best activity and produced ent-CPP exclusively. The peak area of ent-copalol was increased after the ApCPS2 saturation mutation and its configuration was determined by NMR and ESI-MS detection. By appropriately optimizing acetyl-CoA supply and fusion-expressing key enzymes, 35.6 mg/L ent-copalol was generated. In this study, de novo biosynthesis and identification of ent-copalol were achieved and the highest titer ever reported. It provides a platform strain for the further pathway analysis of andrographolide and derivatives and provides a reference for the synthesis of other pharmaceutical intermediates.
期刊介绍:
Synthetic and Systems Biotechnology aims to promote the communication of original research in synthetic and systems biology, with strong emphasis on applications towards biotechnology. This journal is a quarterly peer-reviewed journal led by Editor-in-Chief Lixin Zhang. The journal publishes high-quality research; focusing on integrative approaches to enable the understanding and design of biological systems, and research to develop the application of systems and synthetic biology to natural systems. This journal will publish Articles, Short notes, Methods, Mini Reviews, Commentary and Conference reviews.