lrrc15,骨关节炎疾病中软骨骨化的潜在关键角色

Y. Hamdan , A. Bedraoui , L. Mazini , S. Zayane , B. Essadki , T. Daouda , R. El Fatimy
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引用次数: 0

摘要

简介 OA 是一种以细胞应激和 ECM 退化为特征的关节疾病。其发病表现为轻微和严重损伤引发的分子、解剖和生理紊乱。轻微的改变通过破坏软骨细胞的平衡而引发 OA,促进肥大状态,不仅影响软骨本身,还影响关节内的所有组织,从而导致软骨退化。目的本研究旨在调查 OA 患者和健康人膝关节组织中存在的转录改变,重点是确定对 OA 和软骨骨化的发展有影响的潜在基因。我们使用了 NCBI 基因表达总库中的八个数据集,并将其分为三组:1)mRNA表达谱分析,包括关节滑膜活检组织、软骨基质细胞和间质基质细胞、软骨组织和外周血单核细胞(PBMC);2)非编码RNA(miRNA)谱分析,包括两个滑膜数据集和OA患者的血浆;3)单细胞测序,包括同一患者的滑膜和软骨以及软骨下骨。结果我们的研究结果表明,在不同的组织中有不同的 DEGs,在 mRNA 数据集中,重叠后有 3 个上调基因(COL1A1、COL11A1 和 LRRC15)和 6 个下调基因。在 miRNA 数据集中,有两个 miRNA 下调,只有一个 miRNA 上调。靶标研究发现,miR-1-3p 的一个靶标是 COL1A1、COL11A1 和 LRRC15。基因本体论确定了参与胶原蛋白、软骨形成和机械反应的结构。我们利用单细胞测序技术确定了软骨、滑膜和软骨下骨中的细胞群。在滑膜、软骨细胞和软骨下骨软骨细胞的所有细胞类型中都发现了 COL1A1。软骨下骨和软骨软骨细胞表达 COL11A1,而滑膜细胞不表达。LRRC15在滑膜成纤维细胞、软骨祖细胞、软骨下骨软骨细胞和软骨纤维软骨细胞中均有表达。我们的研究结果发现 LRRC15、COL11A1 和 COL1A1 是可能在合成代谢表型变化和细胞外基质重塑破坏中发挥作用的潜在基因,这为了解 OA 期间关节组织中发生的变化提供了令人感兴趣的见解。在动物模型中,LRRC15 与软骨细胞表型变化、应激反应协调和 ECM 降解有关。此外,还发现 LRRC15 是间充质干细胞(MSC)成骨的关键调节因子,这意味着间充质干细胞会进行成骨分化,而不是软骨分化,从而导致软骨钙化和骨化。这些结果从一个引人入胜的角度揭示了OA期间关节组织中发生的转录变化,并将通过组织样本采集进行补充,从而利用深度测序和RT-PCR继续进行验证。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
LRRC15, A POTENTIAL KEY PLAYER IN CARTILAGE OSSIFICATION IN OSTEOARTHRITIS DISEASE

INTRODUCTION

OA is a joint condition characterized by cellular stress and the deterioration of the ECM. Its onset is manifested by both minor and major injuries triggering molecular, anatomical, and physiological disturbances. Minor alterations initiate OA by disrupting chondrocyte equilibrium, promoting an hypertrophic state causing cartilage degeneration by impacting not only cartilage itself but all tissues within the joint.

OBJECTIVE

This study aims to investigate the transcriptional alterations present in the knee joint tissues for both OA patients and healthy individuals, with a focus on identifying potential genes implications for the development of OA and cartilage ossification.

METHODS

We used eight datasets from the NCBI Gene Expression Omnibus and categorize it into three groups: 1) mRNA expression profiling, which contains joint synovial biopsies, cartilage stromal cells and mesenchymal stromal cells, cartilage tissues, and peripheral blood mononuclear cells (PBMC); 2) non-coding RNA (miRNA) profiling, encompassing two synovial membrane datasets and plasma from OA patients; and 3) single-cell sequencing, including synovial membrane and cartilage from the same patients and subchondral bone. An independent differentially expressed genes (DEG) analysis was performed on each dataset using EdgeR and gene ontology was investigated.

RESULTS

Our findings indicated various DEGs in the different tissues, with three upregulated genes (COL1A1, COL11A1, and LRRC15) and six downregulated genes in mRNA datasets after overlapping. For miRNA datasets, two miRNAs were downregulated and only one miRNA was upregulated. Target research revealed that miR-1-3p targets COL1A1, COL11A1, and LRRC15 from one of miRNA. Gene ontology identified structures involved in collagen, cartilage formation, and mechanical response. We used single cell sequencing to identify cell populations in cartilage, synovial membrane, and subchondral bone. COL1A1 was found in all cell types in the synovial membrane, cartilage cells, and subchondral bone chondrocytes. Subchondral bone and cartilage chondrocytes expressed COL11A1, while synovial membrane cells did not. LRRC15 is expressed in synovial fibroblasts, cartilage progenitors, subchondral bone chondrocytes, and cartilage fibrochondrocytes. The heatmap and bar chart analyses supported these findings, demonstrating gene expression differences and correlation scores between the OA and control groups.

CONCLUSIONS

Our results identified LRRC15, COL11A1, and COL1A1 as potential genes that may play a role into the anabolic phenotypic change and disruption of extracellular matrix remodeling, providing an intriguing insight into the change alterations happening in joint tissues during OA. In animal models, LRRC15 has been linked to changes in chondrocyte phenotype, stress response coordination, and ECM degradation. Furthermore, LRRC15 has been discovered as a key regulator of mesenchymal stem cell (MSC) osteogenesis, implying that MSCs undergo osteogenic differentiation rather than chondrogenic differentiation, resulting in cartilage calcification and ossification. These results give an intriguing perspective on the transcriptional alterations happening in joint tissues during OA and will be supplemented by tissue sample collection, allowing continued validation using deep sequencing and RT-PCR.

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Osteoarthritis imaging
Osteoarthritis imaging Radiology and Imaging
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