在太平洋大垃圾带的细菌定居者中寻找色素。

IF 4.3 2区 生物学 Q2 MICROBIOLOGY
Brittan S. Scales, Christiane Hassenrück, Lynn Moldaenke, Julia Hassa, Christian Rückert-Reed, Christoph Rummel, Corinna Völkner, Robby Rynek, Tobias Busche, Jörn Kalinowski, Annika Jahnke, Mechthild Schmitt-Jansen, Katrin Wendt-Potthoff, Sonja Oberbeckmann
{"title":"在太平洋大垃圾带的细菌定居者中寻找色素。","authors":"Brittan S. Scales,&nbsp;Christiane Hassenrück,&nbsp;Lynn Moldaenke,&nbsp;Julia Hassa,&nbsp;Christian Rückert-Reed,&nbsp;Christoph Rummel,&nbsp;Corinna Völkner,&nbsp;Robby Rynek,&nbsp;Tobias Busche,&nbsp;Jörn Kalinowski,&nbsp;Annika Jahnke,&nbsp;Mechthild Schmitt-Jansen,&nbsp;Katrin Wendt-Potthoff,&nbsp;Sonja Oberbeckmann","doi":"10.1111/1462-2920.16639","DOIUrl":null,"url":null,"abstract":"<p>The Great Pacific Garbage Patch, a significant collection of plastic introduced by human activities, provides an ideal environment to study bacterial lifestyles on plastic substrates. We proposed that bacteria colonizing the floating plastic debris would develop strategies to deal with the ultraviolet-exposed substrate, such as the production of antioxidant pigments. We observed a variety of pigmentation in 67 strains that were directly cultivated from plastic pieces sampled from the Garbage Patch. The genomic analysis of four representative strains, each distinct in taxonomy, revealed multiple pathways for carotenoid production. These pathways include those that produce less common carotenoids and a cluster of photosynthetic genes. This cluster appears to originate from a potentially new species of the <i>Rhodobacteraceae</i> family. This represents the first report of an aerobic anoxygenic photoheterotrophic bacterium from plastic biofilms. Spectral analysis showed that the bacteria actively produce carotenoids, such as beta-carotene and beta-cryptoxanthin, and bacteriochlorophyll a. Furthermore, we discovered that the genetic ability to synthesize carotenoids is more common in plastic biofilms than in the surrounding water communities. Our findings suggest that plastic biofilms could be an overlooked source of bacteria-produced carotenoids, including rare forms. It also suggests that photoreactive molecules might play a crucial role in bacterial biofilm communities in surface water.</p>","PeriodicalId":11898,"journal":{"name":"Environmental microbiology","volume":null,"pages":null},"PeriodicalIF":4.3000,"publicationDate":"2024-06-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1111/1462-2920.16639","citationCount":"0","resultStr":"{\"title\":\"Hunting for pigments in bacterial settlers of the Great Pacific Garbage Patch\",\"authors\":\"Brittan S. Scales,&nbsp;Christiane Hassenrück,&nbsp;Lynn Moldaenke,&nbsp;Julia Hassa,&nbsp;Christian Rückert-Reed,&nbsp;Christoph Rummel,&nbsp;Corinna Völkner,&nbsp;Robby Rynek,&nbsp;Tobias Busche,&nbsp;Jörn Kalinowski,&nbsp;Annika Jahnke,&nbsp;Mechthild Schmitt-Jansen,&nbsp;Katrin Wendt-Potthoff,&nbsp;Sonja Oberbeckmann\",\"doi\":\"10.1111/1462-2920.16639\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>The Great Pacific Garbage Patch, a significant collection of plastic introduced by human activities, provides an ideal environment to study bacterial lifestyles on plastic substrates. We proposed that bacteria colonizing the floating plastic debris would develop strategies to deal with the ultraviolet-exposed substrate, such as the production of antioxidant pigments. We observed a variety of pigmentation in 67 strains that were directly cultivated from plastic pieces sampled from the Garbage Patch. The genomic analysis of four representative strains, each distinct in taxonomy, revealed multiple pathways for carotenoid production. These pathways include those that produce less common carotenoids and a cluster of photosynthetic genes. This cluster appears to originate from a potentially new species of the <i>Rhodobacteraceae</i> family. This represents the first report of an aerobic anoxygenic photoheterotrophic bacterium from plastic biofilms. Spectral analysis showed that the bacteria actively produce carotenoids, such as beta-carotene and beta-cryptoxanthin, and bacteriochlorophyll a. Furthermore, we discovered that the genetic ability to synthesize carotenoids is more common in plastic biofilms than in the surrounding water communities. Our findings suggest that plastic biofilms could be an overlooked source of bacteria-produced carotenoids, including rare forms. It also suggests that photoreactive molecules might play a crucial role in bacterial biofilm communities in surface water.</p>\",\"PeriodicalId\":11898,\"journal\":{\"name\":\"Environmental microbiology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.3000,\"publicationDate\":\"2024-06-20\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1111/1462-2920.16639\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Environmental microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1111/1462-2920.16639\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Environmental microbiology","FirstCategoryId":"99","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1111/1462-2920.16639","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

太平洋大垃圾场是人类活动带来的大量塑料的聚集地,为研究塑料基质上的细菌生活方式提供了理想的环境。我们认为,在漂浮的塑料碎片上定植的细菌会发展出应对紫外线暴露基质的策略,例如产生抗氧化色素。我们在从垃圾场取样的塑料碎片中直接培养出的 67 株菌株中观察到了各种色素。对四种具有代表性的菌株(每种菌株在分类学上都有所不同)进行的基因组分析表明,类胡萝卜素的产生有多种途径。这些途径包括产生不常见类胡萝卜素的途径和光合作用基因簇。该基因簇似乎来自罗杆菌科的一个潜在新物种。这是首次报道塑料生物膜中的需氧无氧光异养细菌。光谱分析显示,该细菌能积极产生类胡萝卜素,如β-胡萝卜素和β-隐黄素,以及细菌叶绿素a。此外,我们还发现合成类胡萝卜素的遗传能力在塑料生物膜中比在周围水体群落中更为常见。我们的研究结果表明,塑料生物膜可能是细菌产生类胡萝卜素(包括稀有形式)的一个被忽视的来源。这也表明,光活性分子可能在地表水的细菌生物膜群落中发挥着至关重要的作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Hunting for pigments in bacterial settlers of the Great Pacific Garbage Patch

Hunting for pigments in bacterial settlers of the Great Pacific Garbage Patch

Hunting for pigments in bacterial settlers of the Great Pacific Garbage Patch

The Great Pacific Garbage Patch, a significant collection of plastic introduced by human activities, provides an ideal environment to study bacterial lifestyles on plastic substrates. We proposed that bacteria colonizing the floating plastic debris would develop strategies to deal with the ultraviolet-exposed substrate, such as the production of antioxidant pigments. We observed a variety of pigmentation in 67 strains that were directly cultivated from plastic pieces sampled from the Garbage Patch. The genomic analysis of four representative strains, each distinct in taxonomy, revealed multiple pathways for carotenoid production. These pathways include those that produce less common carotenoids and a cluster of photosynthetic genes. This cluster appears to originate from a potentially new species of the Rhodobacteraceae family. This represents the first report of an aerobic anoxygenic photoheterotrophic bacterium from plastic biofilms. Spectral analysis showed that the bacteria actively produce carotenoids, such as beta-carotene and beta-cryptoxanthin, and bacteriochlorophyll a. Furthermore, we discovered that the genetic ability to synthesize carotenoids is more common in plastic biofilms than in the surrounding water communities. Our findings suggest that plastic biofilms could be an overlooked source of bacteria-produced carotenoids, including rare forms. It also suggests that photoreactive molecules might play a crucial role in bacterial biofilm communities in surface water.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Environmental microbiology
Environmental microbiology 环境科学-微生物学
CiteScore
9.90
自引率
3.90%
发文量
427
审稿时长
2.3 months
期刊介绍: Environmental Microbiology provides a high profile vehicle for publication of the most innovative, original and rigorous research in the field. The scope of the Journal encompasses the diversity of current research on microbial processes in the environment, microbial communities, interactions and evolution and includes, but is not limited to, the following: the structure, activities and communal behaviour of microbial communities microbial community genetics and evolutionary processes microbial symbioses, microbial interactions and interactions with plants, animals and abiotic factors microbes in the tree of life, microbial diversification and evolution population biology and clonal structure microbial metabolic and structural diversity microbial physiology, growth and survival microbes and surfaces, adhesion and biofouling responses to environmental signals and stress factors modelling and theory development pollution microbiology extremophiles and life in extreme and unusual little-explored habitats element cycles and biogeochemical processes, primary and secondary production microbes in a changing world, microbially-influenced global changes evolution and diversity of archaeal and bacterial viruses new technological developments in microbial ecology and evolution, in particular for the study of activities of microbial communities, non-culturable microorganisms and emerging pathogens
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信