Megan L Kempher, Tyler M Shadid, Jason L Larabee, Jimmy D Ballard
{"title":"艰难梭菌毒素逃逸需要 TcdB2 中的一个序列不变区。","authors":"Megan L Kempher, Tyler M Shadid, Jason L Larabee, Jimmy D Ballard","doi":"10.1128/jb.00096-24","DOIUrl":null,"url":null,"abstract":"<p><p>Sequence differences among the subtypes of <i>Clostridioides difficile</i> toxin TcdB (2,366 amino acids) are broadly distributed across the entire protein, with the notable exception of 76 residues at the protein's carboxy terminus. This sequence invariable region (SIR) is identical at the DNA and protein level among the TcdB variants, suggesting this string of amino acids has undergone selective pressure to prevent alterations. The functional role of the SIR domain in TcdB has not been determined. Analysis of a recombinantly constructed TcdB mutant lacking the SIR domain did not identify changes in TcdB's enzymatic or cytopathic activities. To further assess the SIR region, we constructed a <i>C. difficile</i> strain with the final 228 bp deleted from the <i>tcdB</i> gene, resulting in the production of a truncated form of TcdB lacking the SIR (TcdB2<sub>∆2291-2366</sub>). Using a combination of approaches, we found in the absence of the SIR sequence TcdB2<sub>∆2291-2366</sub> retained cytotoxic activity but was not secreted from <i>C. difficile</i>. TcdB2<sub>∆2291-2366</sub> was not released from the cell under autolytic conditions, indicating the SIR is involved in a more discrete step in toxin escape from the bacterium. Fractionation experiments combined with antibody detection found that TcdB2<sub>∆2291-2366</sub> accumulates at the cell membrane but is unable to complete steps in secretion beyond this point. These data suggest conservation of the SIR domain across variants of TcdB could be influenced by the sequence's role in efficient escape of the toxin from <i>C. difficile</i>.</p><p><strong>Importance: </strong><i>Clostridioides difficile</i> is a leading cause of antibiotic associated disease in the United States. The primary virulence factors produced by <i>C. difficile</i> are two large glucosylating toxins TcdA and TcdB. To date, several sequence variants of TcdB have been identified that differ in various functional properties. Here, we identified a highly conserved region among TcdB subtypes that is required for release of the toxin from <i>C. difficile</i>. This study reveals a putative role for the longest stretch of invariable sequence among TcdB subtypes and provides new details regarding toxin release into the extracellular environment. Improving our understanding of the functional roles of the conserved regions of TcdB variants aids in the development of new, broadly applicable strategies to treat CDI.</p>","PeriodicalId":15107,"journal":{"name":"Journal of Bacteriology","volume":" ","pages":"e0009624"},"PeriodicalIF":2.7000,"publicationDate":"2024-07-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11323933/pdf/","citationCount":"0","resultStr":"{\"title\":\"A sequence invariable region in TcdB2 is required for toxin escape from <i>Clostridioides difficile</i>.\",\"authors\":\"Megan L Kempher, Tyler M Shadid, Jason L Larabee, Jimmy D Ballard\",\"doi\":\"10.1128/jb.00096-24\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Sequence differences among the subtypes of <i>Clostridioides difficile</i> toxin TcdB (2,366 amino acids) are broadly distributed across the entire protein, with the notable exception of 76 residues at the protein's carboxy terminus. This sequence invariable region (SIR) is identical at the DNA and protein level among the TcdB variants, suggesting this string of amino acids has undergone selective pressure to prevent alterations. The functional role of the SIR domain in TcdB has not been determined. Analysis of a recombinantly constructed TcdB mutant lacking the SIR domain did not identify changes in TcdB's enzymatic or cytopathic activities. To further assess the SIR region, we constructed a <i>C. difficile</i> strain with the final 228 bp deleted from the <i>tcdB</i> gene, resulting in the production of a truncated form of TcdB lacking the SIR (TcdB2<sub>∆2291-2366</sub>). Using a combination of approaches, we found in the absence of the SIR sequence TcdB2<sub>∆2291-2366</sub> retained cytotoxic activity but was not secreted from <i>C. difficile</i>. TcdB2<sub>∆2291-2366</sub> was not released from the cell under autolytic conditions, indicating the SIR is involved in a more discrete step in toxin escape from the bacterium. Fractionation experiments combined with antibody detection found that TcdB2<sub>∆2291-2366</sub> accumulates at the cell membrane but is unable to complete steps in secretion beyond this point. These data suggest conservation of the SIR domain across variants of TcdB could be influenced by the sequence's role in efficient escape of the toxin from <i>C. difficile</i>.</p><p><strong>Importance: </strong><i>Clostridioides difficile</i> is a leading cause of antibiotic associated disease in the United States. The primary virulence factors produced by <i>C. difficile</i> are two large glucosylating toxins TcdA and TcdB. To date, several sequence variants of TcdB have been identified that differ in various functional properties. Here, we identified a highly conserved region among TcdB subtypes that is required for release of the toxin from <i>C. difficile</i>. This study reveals a putative role for the longest stretch of invariable sequence among TcdB subtypes and provides new details regarding toxin release into the extracellular environment. Improving our understanding of the functional roles of the conserved regions of TcdB variants aids in the development of new, broadly applicable strategies to treat CDI.</p>\",\"PeriodicalId\":15107,\"journal\":{\"name\":\"Journal of Bacteriology\",\"volume\":\" \",\"pages\":\"e0009624\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2024-07-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11323933/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Bacteriology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1128/jb.00096-24\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/6/18 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q3\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Bacteriology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1128/jb.00096-24","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/6/18 0:00:00","PubModel":"Epub","JCR":"Q3","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
难辨梭状芽孢杆菌毒素 TcdB(2,366 个氨基酸)各亚型之间的序列差异广泛分布于整个蛋白质中,但位于蛋白质羧基末端的 76 个残基除外。在 TcdB 变体中,这一序列不变区(SIR)在 DNA 和蛋白质水平上都是相同的,这表明这串氨基酸经历了选择性压力,以防止发生变化。TcdB 中 SIR 结构域的功能作用尚未确定。对重组构建的缺乏 SIR 结构域的 TcdB 突变体的分析并未发现 TcdB 的酶活性或细胞病理学活性发生了变化。为了进一步评估 SIR 区域,我们构建了一株艰难梭菌菌株,删除了 tcdB 基因的最后 228 bp,从而产生了缺乏 SIR 的截短形式 TcdB(TcdB2∆2291-2366)。通过综合使用多种方法,我们发现在缺乏 SIR 序列的情况下,TcdB2∆2291-2366 仍具有细胞毒性活性,但不会从艰难梭菌中分泌出来。在自溶条件下,TcdB2Δ2291-2366 也不会从细胞中释放出来,这表明 SIR 参与了毒素从细菌中逸出的一个更为独立的步骤。结合抗体检测进行的分馏实验发现,TcdB2∆2291-2366 在细胞膜上积聚,但除此之外无法完成分泌步骤。这些数据表明,TcdB 不同变体中 SIR 结构域的保留可能受到该序列在艰难梭菌毒素有效逃逸过程中所起作用的影响:艰难梭菌是美国抗生素相关疾病的主要病因。艰难梭菌产生的主要毒力因子是两种大型葡萄糖基化毒素 TcdA 和 TcdB。迄今为止,已经发现了几种 TcdB 的序列变体,它们在各种功能特性上存在差异。在这里,我们在 TcdB 亚型中发现了一个高度保守的区域,该区域是艰难梭菌释放毒素所必需的。这项研究揭示了 TcdB 亚型中最长的一段不变序列的潜在作用,并提供了毒素释放到细胞外环境的新细节。提高我们对 TcdB 变体保守区功能作用的认识有助于开发新的、广泛适用的 CDI 治疗策略。
A sequence invariable region in TcdB2 is required for toxin escape from Clostridioides difficile.
Sequence differences among the subtypes of Clostridioides difficile toxin TcdB (2,366 amino acids) are broadly distributed across the entire protein, with the notable exception of 76 residues at the protein's carboxy terminus. This sequence invariable region (SIR) is identical at the DNA and protein level among the TcdB variants, suggesting this string of amino acids has undergone selective pressure to prevent alterations. The functional role of the SIR domain in TcdB has not been determined. Analysis of a recombinantly constructed TcdB mutant lacking the SIR domain did not identify changes in TcdB's enzymatic or cytopathic activities. To further assess the SIR region, we constructed a C. difficile strain with the final 228 bp deleted from the tcdB gene, resulting in the production of a truncated form of TcdB lacking the SIR (TcdB2∆2291-2366). Using a combination of approaches, we found in the absence of the SIR sequence TcdB2∆2291-2366 retained cytotoxic activity but was not secreted from C. difficile. TcdB2∆2291-2366 was not released from the cell under autolytic conditions, indicating the SIR is involved in a more discrete step in toxin escape from the bacterium. Fractionation experiments combined with antibody detection found that TcdB2∆2291-2366 accumulates at the cell membrane but is unable to complete steps in secretion beyond this point. These data suggest conservation of the SIR domain across variants of TcdB could be influenced by the sequence's role in efficient escape of the toxin from C. difficile.
Importance: Clostridioides difficile is a leading cause of antibiotic associated disease in the United States. The primary virulence factors produced by C. difficile are two large glucosylating toxins TcdA and TcdB. To date, several sequence variants of TcdB have been identified that differ in various functional properties. Here, we identified a highly conserved region among TcdB subtypes that is required for release of the toxin from C. difficile. This study reveals a putative role for the longest stretch of invariable sequence among TcdB subtypes and provides new details regarding toxin release into the extracellular environment. Improving our understanding of the functional roles of the conserved regions of TcdB variants aids in the development of new, broadly applicable strategies to treat CDI.
期刊介绍:
The Journal of Bacteriology (JB) publishes research articles that probe fundamental processes in bacteria, archaea and their viruses, and the molecular mechanisms by which they interact with each other and with their hosts and their environments.