构建并验证基于线粒体基因的前列腺癌预后模型

IF 2 4区 医学 Q3 ENDOCRINOLOGY & METABOLISM
Dan Wang, Hui Pan, Shaoping Cheng, Zhigang Huang, Zhenlei Shi, Hao Deng, Junwu Yang, Chenghua Jin, Jin Dai
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引用次数: 0

摘要

本研究试图利用线粒体特征基因建立前列腺癌(PC)预后风险模型。筛选出与 PC 相关的 MTGs 进行 Cox 回归分析,然后建立预后模型。通过生存分析和接收者操作特征曲线(ROC)分析了模型的有效性,并在GEO数据集中验证了模型的准确性。将风险评分与临床因素相结合,使用 Cox 分析验证了风险评分的独立性,然后生成了一个提名图。在两个风险组中分析了格里森评分、微卫星不稳定性(MSI)、免疫微环境和肿瘤突变负荷。最后,通过 q-PCR 测试验证了预后特征基因。筛选出10个与PC相关的MTG,并建立了预后模型。生存分析和ROC曲线表明,该模型能很好地预测PC风险。Cox 回归分析显示,风险评分是一个独立的预后因素。高风险组的 Gleason 评分和 MSI 远高于低风险组。高风险组的ESTIMATE评分、免疫评分、基质评分、免疫细胞、免疫功能、免疫检查点和部分免疫检查点的免疫评分水平明显低于低风险组。两组中突变频率最高的基因是 SPOP、TTN 和 TP53。特征基因的 q-PCR 结果与数据库中的基因表达结果一致。基于MTGs的10基因模型可以准确预测PC患者的预后及其对免疫疗法的反应。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Construction and Validation of a Prognostic Model Based on Mitochondrial Genes in Prostate Cancer.

This study attempted to build a prostate cancer (PC) prognostic risk model with mitochondrial feature genes. PC-related MTGs were screened for Cox regression analyses, followed by establishing a prognostic model. Model validity was analyzed via survival analysis and receiver operating characteristic (ROC) curves, and model accuracy was validated in the GEO dataset. Combining risk score with clinical factors, the independence of the risk score was verified by using Cox analysis, followed by generating a nomogram. The Gleason score, microsatellite instability (MSI), immune microenvironment, and tumor mutation burden were analyzed in two risk groups. Finally, the prognostic feature genes were verified through a q-PCR test. Ten PC-associated MTGs were screened, and a prognostic model was built. Survival analysis and ROC curves illustrated that the model was a good predictor for the risk of PC. Cox regression analysis revealed that risk score acted as an independent prognostic factor. The Gleason score and MSI in the high-risk group were substantially higher than in the low-risk group. Levels of ESTIMATE Score, Immune Score, Stromal Score, immune cells, immune function, immune checkpoint, and immunopheno score of partial immune checkpoints in the high-risk group were significantly lower than in the low-risk group. Genes with the highest mutation frequencies in the two groups were SPOP, TTN, and TP53. The q-PCR results of the feature genes were consistent with the gene expression results in the database. The 10-gene model based on MTGs could accurately predict the prognosis of PC patients and their responses to immunotherapy.

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来源期刊
Hormone and Metabolic Research
Hormone and Metabolic Research 医学-内分泌学与代谢
CiteScore
3.80
自引率
0.00%
发文量
125
审稿时长
3-8 weeks
期刊介绍: Covering the fields of endocrinology and metabolism from both, a clinical and basic science perspective, this well regarded journal publishes original articles, and short communications on cutting edge topics. Speedy publication time is given high priority, ensuring that endocrinologists worldwide get timely, fast-breaking information as it happens. Hormone and Metabolic Research presents reviews, original papers, and short communications, and includes a section on Innovative Methods. With a preference for experimental over observational studies, this journal disseminates new and reliable experimental data from across the field of endocrinology and metabolism to researchers, scientists and doctors world-wide.
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