Anaerobaca lacustris gen.

IF 3.3 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
M.A. Khomyakova , A.Y. Merkel , A.I. Slobodkin
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引用次数: 0

摘要

在数量众多、分布广泛的平滑菌系中,有一个是迄今尚未培养出的栖息在缺氧环境中的 SG8-4 菌群。从一个沿海湖泊(俄罗斯塔曼半岛)的厌氧沉积物中分离出了一种新型厌氧、嗜中性、耐碱、化学有机营养细菌(菌株 M17dextrT)。细胞主要为非运动性球菌,直径 0.3 至 1.0 微米,形成链状或聚集状。细胞具有革兰氏阴性细胞壁,通过二分裂进行分裂。生长温度范围为 20-37 摄氏度(最适温度为 30 摄氏度)。生长的 pH 值范围为 6.5-10.0,最适 pH 值为 8.0-8.5。菌株 M17dextrT 可发酵单糖、双糖和多糖(淀粉、黄原胶、葡聚糖、N-乙酰葡糖胺),但不利用含蛋白质的化合物。主要的细胞脂肪酸为 C16:0 和 C18:0。菌株 M17dextrT 的基因组大小为 5.7 Mb,G+C 含量为 62.49%。基因组包含 345 个 CAZyme 基因。菌株 M17dextrT 在培养系统发育上的近亲是沉积藻目 Phycisphaerae 类的成员。在表征的平滑菌中,与 Anaerohalosphaera lusitana 的 16S rRNA 基因序列相似度最高(88.3%)。根据系统发生组分析,菌株 M17dextrT 与许多未培养的沉积藻类代表菌株一起形成了一个独立的科级菌系。我们建议将菌株 M17dextrT 归入一个新属和新种,即 Anaerobaca lacustris gen.nov.,sp.nov.;模式菌株为 M17dextrT(=VKM B-3571 T = DSM 113417 T = JCM 39238 T = KCTC 25381 T = UQM 41474 T)。该属被归入一个新科,即沉积藻目中的 Anaerobacaceae fam.
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Anaerobaca lacustris gen. nov., sp. nov., an obligately anaerobic planctomycete of the widespread SG8-4 group, isolated from a coastal lake, and proposal of Anaerobacaceae fam. nov

One of the numerous and widespread lineages of planctomycetes is the hitherto uncultured SG8-4 group inhabiting anoxic environments. A novel anaerobic, mesophilic, alkalitolerant, chemoorganotrophic bacterium (strain M17dextrT) was isolated from anaerobic sediment of a coastal lake (Taman Peninsula, Russia). The cell were mainly non-motile cocci, 0.3 to 1.0 µm in diameter forming chains or aggregates. The cells had a Gram-negative cell wall and divided by binary fission. The temperature range for growth was 20–37 0C (optimum at 30 0C). The pH range for growth was 6.5–10.0, with an optimum at pH 8.0–8.5. Strain M17dextrT fermented mono-, di- and polysaccharides (starch, xanthan gum, dextran, N-acetylglucosamine), but did not utilized proteinaceous compounds. Major cellular fatty acids were C16:0 and C18:0. The genome of strain M17dextrT had a size of 5.7 Mb with a G + C content of 62.49 %. The genome contained 345 CAZyme genes. The closest cultured phylogenetic relatives of strain M17dextrT were members of the order Sedimentisphaerales, class Phycisphaerae. Among characterized planctomycetes, the highest 16S rRNA gene sequence similarity (88.3 %) was observed with Anaerohalosphaera lusitana. According to phylogenomic analysis strain M17dextrT together with many uncultured representatives of Sedimentisphaerales forms a separate family‐level lineage. We propose to assign strain M17dextrT to a novel genus and species, Anaerobaca lacustris gen. nov., sp. nov.; the type strain is M17dextrT (=VKM B-3571 T = DSM 113417 T = JCM 39238 T = KCTC 25381 T = UQM 41474 T). This genus is placed in a novel family, Anaerobacaceae fam. nov. within the order Sedimentisphaerales.

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来源期刊
Systematic and applied microbiology
Systematic and applied microbiology 生物-生物工程与应用微生物
CiteScore
7.50
自引率
5.90%
发文量
57
审稿时长
22 days
期刊介绍: Systematic and Applied Microbiology deals with various aspects of microbial diversity and systematics of prokaryotes. It focuses on Bacteria and Archaea; eukaryotic microorganisms will only be considered in rare cases. The journal perceives a broad understanding of microbial diversity and encourages the submission of manuscripts from the following branches of microbiology:
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