利用原生荧光和光谱解卷积对病原菌进行表征和分类。

IF 2 3区 物理与天体物理 Q3 BIOCHEMICAL RESEARCH METHODS
Anandh Sundaramoorthy, Ganesan Bharanidharan, Aruna Prakasarao, Singaravelu Ganesan
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引用次数: 0

摘要

对致病细菌菌株进行鉴定和分类是当前疾病早期治疗的一个重要课题。在这项研究中,利用稳态和时间分辨荧光光谱法对八种不同致病细菌菌株的蛋白质荧光进行了表征。光谱解卷积法还用于分解不同本征荧光团的发射贡献,并提取了各种关键参数,如荧光团的强度、发射最大值、发射线宽和光学氧化还原比。不同细菌菌株平均寿命值的变化具有良好的统计学意义(p ≤ 0.01)。细菌菌株光物理特性的变化是由于蛋白质构象状态的不同造成的。通过对八种不同细菌菌株在 280 nm 激发波长下的荧光发射光谱进行逐步多重线性判别分析,原始组和交叉验证组的分类准确率分别为 100%和 99.5%。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Characterization and classification of pathogenic bacteria using native fluorescence and spectral deconvolution

Characterization and classification of pathogenic bacteria using native fluorescence and spectral deconvolution

Identification and classification of pathogenic bacterial strains is of current interest for the early treatment of diseases. In this work, protein fluorescence from eight different pathogenic bacterial strains were characterized using steady state and time resolved fluorescence spectroscopy. The spectral deconvolution method was also employed to decompose the emission contribution from different intrinsic fluorophores and extracted various key parameters, such as intensity, emission maxima, emission line width of the fluorophores, and optical redox ratio. The change in average lifetime values across different bacterial strains exhibits good statistical significance (p ≤ 0.01). The variations in the photophysical characteristics of bacterial strains are due to the different conformational states of the proteins. The stepwise multiple linear discriminate analysis of fluorescence emission spectra at 280 nm excitation across eight different bacterial strains classifies the original groups and cross validated group with 100% and 99.5% accuracy, respectively.

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来源期刊
Journal of Biophotonics
Journal of Biophotonics 生物-生化研究方法
CiteScore
5.70
自引率
7.10%
发文量
248
审稿时长
1 months
期刊介绍: The first international journal dedicated to publishing reviews and original articles from this exciting field, the Journal of Biophotonics covers the broad range of research on interactions between light and biological material. The journal offers a platform where the physicist communicates with the biologist and where the clinical practitioner learns about the latest tools for the diagnosis of diseases. As such, the journal is highly interdisciplinary, publishing cutting edge research in the fields of life sciences, medicine, physics, chemistry, and engineering. The coverage extends from fundamental research to specific developments, while also including the latest applications.
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