网络结构指标可预测食物网的生态稳健性

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Yi Tang, Fengzhen Wang, Wenhao Zhou
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引用次数: 0

摘要

食物网的稳健性是生态系统稳定性的一个重要方面,生态学对此进行了广泛的研究。然而,机器学习技术在预测食物网稳健性和识别关键网络结构指标方面的潜力尚未得到充分探索。我们比较了不同机器学习方法的适用性,并评估了网络结构指标在预测食物网稳健性方面的相对重要性。我们利用跨越不同生态系统的各种食物网数据集来计算网络结构指标,其中包括平均距离(AD)、介度中心性(BC)、方向连通性(C)、亲近中心性(CC)、直径(D)、度中心性(DC)、边缘介度中心性(EBC)、链接数(L)、链接密度(LD)和节点数(N)。然后,我们比较了人工神经网络(ANN)、随机森林(RF)、最小绝对收缩和选择算子(LASSO)以及决策树(DT)等机器学习方法的性能,并评估了网络结构指标对鲁棒性预测的相对重要性。结果表明,RF 模型性能最佳(MAE = 0.0178,RMSE = 0.0263,R2 = 0.9063)。同时,CC 指标对预测食物网的稳健性有显著影响。建议在预测食物网稳健性时,应认真考虑 RF 模型和 CC 指标。这项研究阐明了采用各种机器学习方法和指标预测食物网稳健性时的不同结果。它通过展示机器学习模型在预测食物网稳健性方面的精确能力,极大地加深了我们的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Network structure indicators predict ecological robustness in food webs

Network structure indicators predict ecological robustness in food webs

Food web robustness is a critical aspect of ecosystem stability and has been extensively studied in ecology. However, the potential of machine learning techniques in predicting food web robustness and the identification of key network structure indicators have not been fully explored. We compared the suitability of different machine learning methods and assessed the relative importance of network structure indicators for predicting the robustness of food webs. We utilized a variety of food web datasets spanning different ecosystems to calculate network structure indicators, which include average distance (AD), betweenness centrality (BC), directional connectivity (C), closeness centrality (CC), diameter (D), degree centrality (DC), edge betweenness centrality (EBC), number of links (L), linkage density (LD), and number of nodes (N). We then compared the performance of machine learning methods, including artificial neural network (ANN), random forest (RF), least absolute shrinkage and selection operator (LASSO), and decision tree (DT), and evaluated the relative importance of network structure indicators on robustness predictions. The results demonstrate that the RF model has the best performance (MAE = 0.0178, RMSE = 0.0263, R2 = 0.9063). Meanwhile, the CC indicator has a significant impact in predicting robustness of food webs. It is suggested that both the RF model and the CC indicator should be considered seriously in predicting food web robustness. This research elucidates the differential outcomes when various machine learning methodologies and indicators are employed to predict the robustness of food webs. It significantly enhances our understanding by demonstrating the precise capability of machine learning models in forecasting the robustness of food webs.

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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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