{"title":"基因簇cehBDEF负责将根瘤菌X9菌株中的1,2-二羟基萘转化为水杨酸盐","authors":"Yidong Zhou , Hongfei Liu , Zhenyang Shen , Wenbin Chang , Baiyang Zhang , Chunli Xia , Mingliang Zhang , Qing Hong","doi":"10.1016/j.ibiod.2024.105818","DOIUrl":null,"url":null,"abstract":"<div><p><em>Rhizobium</em> sp. strain X9 was able to degrade 1-naphthol via 1,2-dihydroxynaphthalene (1,2-DHN), salicylate and gentisate. We have identified the two component hydroxylase gene <em>cehC1C2</em> (responsible for the conversion of 1-naphthol to 1,2-DHN) and genes <em>cehG</em>, <em>cehH</em>, and <em>cehI</em> involved in CoA dependent hydroxylation reaction (conversion of salicylate to gentisate). However, the other genes involved in the degradation pathway (from 1,2-DHN to salicylate) have not been identified yet. In this study, the <em>cehBDEF</em> gene cluster organized in the same operon was identified to be involved in the degradation of 1,2-DHN to salicylate. CehB was a novel 1,2-DHN dioxygenase that catalyzes 1,2-DHN to 2-hydroxychromene-2-carboxylate (HCCA), sharing only 28.2% amino acid identity with catechol 2,3-dioxygenase (P31003). CehD, cehE and CehF were conserved with the previously reported corresponding enzymes in 1-naphthol degradation (identity >60%). They are responsible for the successive conversion of HCCA to salicylate. The current study fills in the gap of the genes involved in the 1-naphthol degradation in strain X9.</p></div>","PeriodicalId":13643,"journal":{"name":"International Biodeterioration & Biodegradation","volume":null,"pages":null},"PeriodicalIF":4.1000,"publicationDate":"2024-05-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Gene cluster cehBDEF is responsible for the conversion of 1,2-dihydroxynaphthalene to salicylate in Rhizobium sp. strain X9\",\"authors\":\"Yidong Zhou , Hongfei Liu , Zhenyang Shen , Wenbin Chang , Baiyang Zhang , Chunli Xia , Mingliang Zhang , Qing Hong\",\"doi\":\"10.1016/j.ibiod.2024.105818\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p><em>Rhizobium</em> sp. strain X9 was able to degrade 1-naphthol via 1,2-dihydroxynaphthalene (1,2-DHN), salicylate and gentisate. We have identified the two component hydroxylase gene <em>cehC1C2</em> (responsible for the conversion of 1-naphthol to 1,2-DHN) and genes <em>cehG</em>, <em>cehH</em>, and <em>cehI</em> involved in CoA dependent hydroxylation reaction (conversion of salicylate to gentisate). However, the other genes involved in the degradation pathway (from 1,2-DHN to salicylate) have not been identified yet. In this study, the <em>cehBDEF</em> gene cluster organized in the same operon was identified to be involved in the degradation of 1,2-DHN to salicylate. CehB was a novel 1,2-DHN dioxygenase that catalyzes 1,2-DHN to 2-hydroxychromene-2-carboxylate (HCCA), sharing only 28.2% amino acid identity with catechol 2,3-dioxygenase (P31003). CehD, cehE and CehF were conserved with the previously reported corresponding enzymes in 1-naphthol degradation (identity >60%). They are responsible for the successive conversion of HCCA to salicylate. The current study fills in the gap of the genes involved in the 1-naphthol degradation in strain X9.</p></div>\",\"PeriodicalId\":13643,\"journal\":{\"name\":\"International Biodeterioration & Biodegradation\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":4.1000,\"publicationDate\":\"2024-05-29\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Biodeterioration & Biodegradation\",\"FirstCategoryId\":\"93\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0964830524000891\",\"RegionNum\":2,\"RegionCategory\":\"环境科学与生态学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Biodeterioration & Biodegradation","FirstCategoryId":"93","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0964830524000891","RegionNum":2,"RegionCategory":"环境科学与生态学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
Gene cluster cehBDEF is responsible for the conversion of 1,2-dihydroxynaphthalene to salicylate in Rhizobium sp. strain X9
Rhizobium sp. strain X9 was able to degrade 1-naphthol via 1,2-dihydroxynaphthalene (1,2-DHN), salicylate and gentisate. We have identified the two component hydroxylase gene cehC1C2 (responsible for the conversion of 1-naphthol to 1,2-DHN) and genes cehG, cehH, and cehI involved in CoA dependent hydroxylation reaction (conversion of salicylate to gentisate). However, the other genes involved in the degradation pathway (from 1,2-DHN to salicylate) have not been identified yet. In this study, the cehBDEF gene cluster organized in the same operon was identified to be involved in the degradation of 1,2-DHN to salicylate. CehB was a novel 1,2-DHN dioxygenase that catalyzes 1,2-DHN to 2-hydroxychromene-2-carboxylate (HCCA), sharing only 28.2% amino acid identity with catechol 2,3-dioxygenase (P31003). CehD, cehE and CehF were conserved with the previously reported corresponding enzymes in 1-naphthol degradation (identity >60%). They are responsible for the successive conversion of HCCA to salicylate. The current study fills in the gap of the genes involved in the 1-naphthol degradation in strain X9.
期刊介绍:
International Biodeterioration and Biodegradation publishes original research papers and reviews on the biological causes of deterioration or degradation.