Ying Chen , Ai-Ping Lv , Meng-Meng Li , Yu-Ting OuYang , Zheng-Han Lian , Le-Bin Chen , Ze-Tao Liu , Lan Liu , Jian-Yu Jiao , Wen-Jun Li
{"title":"Ferviditalea candida gen.","authors":"Ying Chen , Ai-Ping Lv , Meng-Meng Li , Yu-Ting OuYang , Zheng-Han Lian , Le-Bin Chen , Ze-Tao Liu , Lan Liu , Jian-Yu Jiao , Wen-Jun Li","doi":"10.1016/j.anaerobe.2024.102866","DOIUrl":null,"url":null,"abstract":"<div><h3>Objective</h3><p>The family <em>Paenibacillaceae</em> is linked to the order <em>Caryophanales</em>. <em>Paenibacillaceae</em> members residing in compost or soil play crucial roles in nutrient recycling and breaking down complex organic materials. However, our understanding of <em>Paenibacillaceae</em> remains limited.</p></div><div><h3>Methods</h3><p>Strain SYSU GA230002<sup>T</sup> was conclusively identified using a polyphasic taxonomic approach frequently utilized in bacterial systematics. Standard microbiological techniques were employed to characterize the morphology and biochemistry of strain SYSU GA230002<sup>T</sup>.</p></div><div><h3>Results</h3><p>An anaerobic and gram--negative bacterium, designated SYSU GA230002<sup>T</sup>, was isolated from geothermally heated soil of Tengchong, Yunnan Province, south-west China. Phylogenetic analyses based on 16S rRNA gene sequences and genomes showed that strain SYSU GA230002<sup>T</sup> belongs to the family <em>Paenibacillaceae</em>. 16S rRNA gene sequence similarity (<94.0 %), ANI (<71.95 %) and AAI values (<58.67 %) between strain SYSU GA230002<sup>T</sup> with other members of the family were lower than the threshold values recommended for distinguishing novel species. Growth was observed at 30-45 °C (optimum, 37 °C), pH 7.0–8.0 (optimum, pH 7.5) and in 0–3.0 % (w/v) NaCl concentrations (optimum, 0 %). The major fatty acids detected were anteiso-C<sub>15:0</sub>, iso-C<sub>16:0</sub> and iso-C<sub>17:0</sub>. The polar lipids included diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, one unidentified phospholipid, one unidentified aminolipid and two unidentified glycolipids. The respiratory quinone was MK-7. The DNA G + C content of strain SYSU GA230002<sup>T</sup> was 49.87 %.</p></div><div><h3>Conclusion</h3><p>Based on the results of morphological, physiological properties, and chemotaxonomic characteristics, this strain is proposed to represent a new species of a new genus <em>Ferviditalea candida</em> gen. nov., sp. nov. The type strain of the type species is SYSU GA230002<sup>T</sup> (=KCTC 25726<sup>T</sup> = GDMCC 1.4160<sup>T</sup>).</p></div>","PeriodicalId":8050,"journal":{"name":"Anaerobe","volume":"88 ","pages":"Article 102866"},"PeriodicalIF":2.5000,"publicationDate":"2024-05-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Ferviditalea candida gen. nov., sp. nov., a novel member of the family Paenibacillaceae isolated from a geothermal area\",\"authors\":\"Ying Chen , Ai-Ping Lv , Meng-Meng Li , Yu-Ting OuYang , Zheng-Han Lian , Le-Bin Chen , Ze-Tao Liu , Lan Liu , Jian-Yu Jiao , Wen-Jun Li\",\"doi\":\"10.1016/j.anaerobe.2024.102866\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Objective</h3><p>The family <em>Paenibacillaceae</em> is linked to the order <em>Caryophanales</em>. <em>Paenibacillaceae</em> members residing in compost or soil play crucial roles in nutrient recycling and breaking down complex organic materials. However, our understanding of <em>Paenibacillaceae</em> remains limited.</p></div><div><h3>Methods</h3><p>Strain SYSU GA230002<sup>T</sup> was conclusively identified using a polyphasic taxonomic approach frequently utilized in bacterial systematics. Standard microbiological techniques were employed to characterize the morphology and biochemistry of strain SYSU GA230002<sup>T</sup>.</p></div><div><h3>Results</h3><p>An anaerobic and gram--negative bacterium, designated SYSU GA230002<sup>T</sup>, was isolated from geothermally heated soil of Tengchong, Yunnan Province, south-west China. Phylogenetic analyses based on 16S rRNA gene sequences and genomes showed that strain SYSU GA230002<sup>T</sup> belongs to the family <em>Paenibacillaceae</em>. 16S rRNA gene sequence similarity (<94.0 %), ANI (<71.95 %) and AAI values (<58.67 %) between strain SYSU GA230002<sup>T</sup> with other members of the family were lower than the threshold values recommended for distinguishing novel species. Growth was observed at 30-45 °C (optimum, 37 °C), pH 7.0–8.0 (optimum, pH 7.5) and in 0–3.0 % (w/v) NaCl concentrations (optimum, 0 %). The major fatty acids detected were anteiso-C<sub>15:0</sub>, iso-C<sub>16:0</sub> and iso-C<sub>17:0</sub>. The polar lipids included diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, one unidentified phospholipid, one unidentified aminolipid and two unidentified glycolipids. The respiratory quinone was MK-7. The DNA G + C content of strain SYSU GA230002<sup>T</sup> was 49.87 %.</p></div><div><h3>Conclusion</h3><p>Based on the results of morphological, physiological properties, and chemotaxonomic characteristics, this strain is proposed to represent a new species of a new genus <em>Ferviditalea candida</em> gen. nov., sp. nov. The type strain of the type species is SYSU GA230002<sup>T</sup> (=KCTC 25726<sup>T</sup> = GDMCC 1.4160<sup>T</sup>).</p></div>\",\"PeriodicalId\":8050,\"journal\":{\"name\":\"Anaerobe\",\"volume\":\"88 \",\"pages\":\"Article 102866\"},\"PeriodicalIF\":2.5000,\"publicationDate\":\"2024-05-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Anaerobe\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1075996424000490\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Anaerobe","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1075996424000490","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Ferviditalea candida gen. nov., sp. nov., a novel member of the family Paenibacillaceae isolated from a geothermal area
Objective
The family Paenibacillaceae is linked to the order Caryophanales. Paenibacillaceae members residing in compost or soil play crucial roles in nutrient recycling and breaking down complex organic materials. However, our understanding of Paenibacillaceae remains limited.
Methods
Strain SYSU GA230002T was conclusively identified using a polyphasic taxonomic approach frequently utilized in bacterial systematics. Standard microbiological techniques were employed to characterize the morphology and biochemistry of strain SYSU GA230002T.
Results
An anaerobic and gram--negative bacterium, designated SYSU GA230002T, was isolated from geothermally heated soil of Tengchong, Yunnan Province, south-west China. Phylogenetic analyses based on 16S rRNA gene sequences and genomes showed that strain SYSU GA230002T belongs to the family Paenibacillaceae. 16S rRNA gene sequence similarity (<94.0 %), ANI (<71.95 %) and AAI values (<58.67 %) between strain SYSU GA230002T with other members of the family were lower than the threshold values recommended for distinguishing novel species. Growth was observed at 30-45 °C (optimum, 37 °C), pH 7.0–8.0 (optimum, pH 7.5) and in 0–3.0 % (w/v) NaCl concentrations (optimum, 0 %). The major fatty acids detected were anteiso-C15:0, iso-C16:0 and iso-C17:0. The polar lipids included diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, one unidentified phospholipid, one unidentified aminolipid and two unidentified glycolipids. The respiratory quinone was MK-7. The DNA G + C content of strain SYSU GA230002T was 49.87 %.
Conclusion
Based on the results of morphological, physiological properties, and chemotaxonomic characteristics, this strain is proposed to represent a new species of a new genus Ferviditalea candida gen. nov., sp. nov. The type strain of the type species is SYSU GA230002T (=KCTC 25726T = GDMCC 1.4160T).
期刊介绍:
Anaerobe is essential reading for those who wish to remain at the forefront of discoveries relating to life processes of strictly anaerobes. The journal is multi-disciplinary, and provides a unique forum for those investigating anaerobic organisms that cause infections in humans and animals, as well as anaerobes that play roles in microbiomes or environmental processes.
Anaerobe publishes reviews, mini reviews, original research articles, notes and case reports. Relevant topics fall into the broad categories of anaerobes in human and animal diseases, anaerobes in the microbiome, anaerobes in the environment, diagnosis of anaerobes in clinical microbiology laboratories, molecular biology, genetics, pathogenesis, toxins and antibiotic susceptibility of anaerobic bacteria.