Mary Hanson, Geoff Petch, Beverley Adams-Groom, Thor-Bjørn Ottosen, Carsten A. Skjøth
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Here, rural bioaerosol composition during late summer and autumn was captured by MiSEQ sequencing of the rRNA internal transcribed spacer 2 (ITS2) region, a common marker for taxonomic variation. Meteorological parameters were recorded from a proximal weather station. The composition of atmospheric taxa demonstrated that deciduous tree DNA forms part of the bioaerosol community during autumn and, for several common broadleaved tree species, atmospheric DNA abundance correlated to high wind events. This suggests that both flowering and autumn storms cause bioaerosols from deciduous trees that can be detected with eDNA approaches. 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引用次数: 0
摘要
生物气溶胶是植物物候学的有用指标,可以显示气候变化对当地和区域范围的影响(如花粉监测/开花物候学)。利用 eDNA 方法分析生物气溶胶越来越流行,可以量化空气传播的植物环境 DNA(eDNA)的多样性以及植物和树木的开花季节。阔叶树和其他多年生树种的叶片脱落也能表明植物健康状况对气候的反应。叶片脱落主要发生在秋季,是对季节性生长条件和环境因素(如光周期变化和温度降低)的反应。在此期间,生物物质会大量释放到环境中。在这里,通过对 rRNA 内部转录间隔区 2 (ITS2) 进行 MiSEQ 测序,捕捉了夏末和秋季农村生物气溶胶的组成。气象参数由附近的气象站记录。大气分类群的组成表明,落叶树 DNA 是秋季生物气溶胶群落的一部分,对于几种常见的阔叶树种来说,大气中的 DNA 丰度与大风事件相关。这表明,开花和秋季风暴都会造成落叶树的生物气溶胶,可以通过 eDNA 方法检测到。在使用 eDNA 方法分析来自树木的花粉或其他碎片时,必须考虑到这一点。
Storms facilitate airborne DNA from leaf fragments outside the main tree pollen season
Bioaerosols are useful indicators of plant phenology and can demonstrate the impacts of climate change on both local and regional scales (e.g. pollen monitoring/flowering phenology). Analysing bioaerosols with eDNA approaches are becoming more popular to quantify the diversity of airborne plant environmental DNA (eDNA) and flowering season of plants and trees. Leaf abscission from broadleaved trees and other perennial species can also indicate the status of plant health in response to climate. This happens primarily during autumn in response to seasonal growth conditions and environmental factors, such as changing photoperiod and reduced temperatures. During this period biological material is released in larger quantities to the environment. Here, rural bioaerosol composition during late summer and autumn was captured by MiSEQ sequencing of the rRNA internal transcribed spacer 2 (ITS2) region, a common marker for taxonomic variation. Meteorological parameters were recorded from a proximal weather station. The composition of atmospheric taxa demonstrated that deciduous tree DNA forms part of the bioaerosol community during autumn and, for several common broadleaved tree species, atmospheric DNA abundance correlated to high wind events. This suggests that both flowering and autumn storms cause bioaerosols from deciduous trees that can be detected with eDNA approaches. This is an aspect that must be considered when eDNA methods are used to analyse either pollen or other fragments from trees.
期刊介绍:
Associated with the International Association for Aerobiology, Aerobiologia is an international medium for original research and review articles in the interdisciplinary fields of aerobiology and interaction of human, plant and animal systems on the biosphere. Coverage includes bioaerosols, transport mechanisms, biometeorology, climatology, air-sea interaction, land-surface/atmosphere interaction, biological pollution, biological input to global change, microbiology, aeromycology, aeropalynology, arthropod dispersal and environmental policy. Emphasis is placed on respiratory allergology, plant pathology, pest management, biological weathering and biodeterioration, indoor air quality, air-conditioning technology, industrial aerobiology and more.
Aerobiologia serves aerobiologists, and other professionals in medicine, public health, industrial and environmental hygiene, biological sciences, agriculture, atmospheric physics, botany, environmental science and cultural heritage.