Gang Zhang, Lin Zhu, Hao-Jie Nie, Yu-Guo Bao, Yun-Long Cheng
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The results showed that there was an consistent increasing trend in the publication number of the application of BSA in crop breeding both in the domestic and foreign journals year by year. Ranking of the top countries according to the number of publications was China, the United States and India. The Huazhong Agricultural University displayed the highest number of publications in the CNKI database, while the Chinese Academy of Agricultural Sciences was found to have the highest number of publications in the WOS database. The published articles related to the application of BSA in crop breeding abroad mainly focused on the disciplines such as plant science, agronomy, horticulture and genetics, while those in China mainly concentrated on such disciplines as plant science, plant protection, horticulture and biology. The top three authors in terms of influence in the field of appling BSA in crop breeding were Michelmore RW, Kosambi DD and Li H, while Michelmore RW, Lander ES and Li H had closer cooperations with other authors. The top three crops relating to the studies of BSA were rice(Oryza sativa), soybean(Glycine max), corn(Zea mays L.) with the hot spot traits of disease resistance and plant height domestically. The top three crops involving the studies of BSA were rice, Arabidopsis thaliana and wheat(Triticum aestivum L.) with hot spot traits of disease resistance abroad. Up to now, BSA was mainly used to localize and functionally verify the candidate genes linking target traits and the mutated genes in crops in the domestical documents, while the foreign published studies based on BSA were mainly focused on the fine mapping and functional verification of target trait genes aiming at the revelation of genetic mechanisms in crops. Research frontier analysis indicated that rice, peanuts(Arachis hypogaea L.), upland cotton(Gossypium hirsutum L.) would be the main objects of studies concerning application of BSA in crop breeding with the hot topics of crop mutants and crop metabolites in the future.</p>","PeriodicalId":35536,"journal":{"name":"遗传","volume":"46 5","pages":"360-372"},"PeriodicalIF":0.0000,"publicationDate":"2024-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Application and prospect of BSA method based on bibliometrics in crop breeding.\",\"authors\":\"Gang Zhang, Lin Zhu, Hao-Jie Nie, Yu-Guo Bao, Yun-Long Cheng\",\"doi\":\"10.16288/j.yczz.23-292\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>In order to understand the progress and frontier in the application of BSA(bulked segregant analysis) method in crop breeding and to reflect objectively the contribution of different countries, institutions and researchers in this field at home and abroad, this study analyzed 2111 items in the WOS (Web of Science) database from 2000 to 2023 and 446 items in the CNKI (China National through Knowledge Infrastructure) database from 2003 to 2023, regarding the researches of the application of BSA in crop breeding, basing on bibliometric analysis methods using CiteSpace software including keyword co-occurrence analysis, highlight word analysis, keyword clustering analysis, clustering timeline analysis and author co-citation. 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引用次数: 0
摘要
为了解BSA(bulked segregant analysis)方法在作物育种中的应用进展和前沿,客观反映国内外不同国家、机构和研究人员在该领域的贡献,本研究分析了WOS(Web of Science)数据库中2000-2023年的2111个条目和CNKI(China National Through Knowledge Infrastructure)数据库中2003-2023年的446个条目、根据 CiteSpace 软件的文献计量分析方法,包括关键词共现分析、高亮词分析、关键词聚类分析、聚类时间轴分析和作者共引,对 BSA 在作物育种中的应用研究进行了分析。结果表明,BSA 在作物育种中的应用在国内外期刊上的发表数量呈逐年上升趋势。按发表数量排名,中国、美国和印度位居前列。华中农业大学在 CNKI 数据库中的发文量最高,而中国农业科学院在 WOS 数据库中的发文量最高。国外发表的与 BSA 在作物育种中的应用相关的文章主要集中在植物学、农学、园艺学和遗传学等学科,而国内发表的文章主要集中在植物学、植物保护学、园艺学和生物学等学科。在将 BSA 应用于作物育种领域方面,影响力排名前三位的作者分别是 Michelmore RW、Kosambi DD 和 Li H,而 Michelmore RW、Lander ES 和 Li H 与其他作者的合作关系较为密切。与 BSA 研究相关的前三位作物是水稻(Oryza sativa)、大豆(Glycine max)和玉米(Zea mays L.),其热点性状是抗病性和株高。涉及 BSA 研究的前三位作物是水稻、拟南芥和小麦(Triticum aestivum L.),其抗病性是国外的热点性状。迄今为止,国内文献中的 BSA 主要用于定位和功能验证连接目标性状的候选基因和作物中的突变基因,而国外已发表的基于 BSA 的研究主要集中在目标性状基因的精细图谱绘制和功能验证,旨在揭示作物的遗传机制。研究前沿分析表明,水稻、花生(Arachis hypogaea L.)、陆地棉(Gossypium hirsutum L.)等作物突变体和作物代谢物将是未来作物育种中应用 BSA 的主要研究对象。
Application and prospect of BSA method based on bibliometrics in crop breeding.
In order to understand the progress and frontier in the application of BSA(bulked segregant analysis) method in crop breeding and to reflect objectively the contribution of different countries, institutions and researchers in this field at home and abroad, this study analyzed 2111 items in the WOS (Web of Science) database from 2000 to 2023 and 446 items in the CNKI (China National through Knowledge Infrastructure) database from 2003 to 2023, regarding the researches of the application of BSA in crop breeding, basing on bibliometric analysis methods using CiteSpace software including keyword co-occurrence analysis, highlight word analysis, keyword clustering analysis, clustering timeline analysis and author co-citation. The results showed that there was an consistent increasing trend in the publication number of the application of BSA in crop breeding both in the domestic and foreign journals year by year. Ranking of the top countries according to the number of publications was China, the United States and India. The Huazhong Agricultural University displayed the highest number of publications in the CNKI database, while the Chinese Academy of Agricultural Sciences was found to have the highest number of publications in the WOS database. The published articles related to the application of BSA in crop breeding abroad mainly focused on the disciplines such as plant science, agronomy, horticulture and genetics, while those in China mainly concentrated on such disciplines as plant science, plant protection, horticulture and biology. The top three authors in terms of influence in the field of appling BSA in crop breeding were Michelmore RW, Kosambi DD and Li H, while Michelmore RW, Lander ES and Li H had closer cooperations with other authors. The top three crops relating to the studies of BSA were rice(Oryza sativa), soybean(Glycine max), corn(Zea mays L.) with the hot spot traits of disease resistance and plant height domestically. The top three crops involving the studies of BSA were rice, Arabidopsis thaliana and wheat(Triticum aestivum L.) with hot spot traits of disease resistance abroad. Up to now, BSA was mainly used to localize and functionally verify the candidate genes linking target traits and the mutated genes in crops in the domestical documents, while the foreign published studies based on BSA were mainly focused on the fine mapping and functional verification of target trait genes aiming at the revelation of genetic mechanisms in crops. Research frontier analysis indicated that rice, peanuts(Arachis hypogaea L.), upland cotton(Gossypium hirsutum L.) would be the main objects of studies concerning application of BSA in crop breeding with the hot topics of crop mutants and crop metabolites in the future.
期刊介绍:
Hereditas is a national academic journal sponsored by the Institute of Genetics and Developmental Biology of the Chinese Academy of Sciences and the Chinese Society of Genetics and published by Science Press. It is a Chinese core journal and a Chinese high-quality scientific journal. The journal mainly publishes innovative research papers in the fields of genetics, genomics, cell biology, developmental biology, biological evolution, genetic engineering and biotechnology; new technologies and new methods; monographs and reviews on hot issues in the discipline; academic debates and discussions; experience in genetics teaching; introductions to famous geneticists at home and abroad; genetic counseling; information on academic conferences at home and abroad, etc. Main columns: review, frontier focus, research report, technology and method, resources and platform, experimental operation guide, genetic resources, genetics teaching, scientific news, etc.