梅里洛氏菌(Sinorhizobium meliloti)的共生体 Mediterranense 在兰萨罗特岛(加那利群岛)各地萌发了对普通相思豆的结瘤作用:对这一共生体的修订支持了关于划定中生菌素共生体界限和定义四个新共生体的建议

IF 3.3 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
José David Flores-Félix , Fernando Sánchez-Juanes , Laura Pulido-Suárez , Encarna Velázquez , Milagros León-Barrios
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引用次数: 0

摘要

最初是在突尼斯和兰萨罗特岛(加那利群岛)东部的一个地方的普通相思豆(Phaseolus vulgaris)结核中发现了麦角菌(Sinorhizobium meliloti)的地中海共生菌(symbiovar mediterranense)。在这里,我们发现麦地那龙杆菌的共生菌也能在该岛西部的两个地方使普通相思豆有节。对共生菌株 nodA 和 nodC 基因的分析揭示了 Mediterranense 共生菌株的复杂性,其中包括属于多个系统发育系和系统集群的菌株。对 nodA 和 nodC 系统发育的比较表明,nodC 是划分中生菌素共生体的最清晰的系统发育标记。考虑到该基因在几个共生体(尤其是中生共生体)中的相似度约为 95%,区分它们的临界值应该更低。考虑到 Bradyrhizobium 属的 nodC 基因临界相似度值约为 92%,而所有根瘤菌属的共生体概念都是相同的,我们建议在所有这些属中采用这一值来划分共生体。因此,我们建议将 aegeanense 和 fredii 合并为一个共生体 fredii,并定义四个新的共生体,分别命名为 asiaense、culleni、sudanense 和 tunisiaense。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The symbiovar mediterranense of Sinorhizobium meliloti nodulates Phaseolus vulgaris across Lanzarote (Canary Islands): A revision of this symbiovar supports a proposal to delimit symbiovars boundaries in Sinorhizobium and to define four new symbiovars

The symbiovar mediterranense of Sinorhizobium meliloti was initially found in Phaseolus vulgaris nodules in Tunisia and in an eastern location of Lanzarote (Canary Islands). Here we show that the symbiovar mediterranense of S. meliloti also nodulates P. vulgaris in two western locations of this Island. The analyses of the symbiotic nodA and nodC genes reveal the complexity of the symbiovar mediterranense which encompasses strains belonging to several phylogenetic lineages and clusters. The comparison of the nodA and nodC phylogenies showed that the nodC was the most resolutive phylogenetic marker for the delineation of Sinorhizobium symbiovars. Considering that the similarity of this gene within several symbiovars, particularly mediterranense, is around 95 %, the cut-off value for their differentiation should be lower. Considering that a nodC gene cut-off similarity value of around 92 % is accepted for the genus Bradyrhizobium and that the symbiovar concept is identical in all rhizobial genera, we propose to apply this value for symbiovars delineation within all these genera. Therefore, using this cut-off value for the nodC gene analysis of Sinorhizobium symbiovars, we propose to merge the symbiovars aegeanense and fredii into the single symbiovar fredii and to define four novel symbiovars with the names asiaense, culleni, sudanense and tunisiaense.

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来源期刊
Systematic and applied microbiology
Systematic and applied microbiology 生物-生物工程与应用微生物
CiteScore
7.50
自引率
5.90%
发文量
57
审稿时长
22 days
期刊介绍: Systematic and Applied Microbiology deals with various aspects of microbial diversity and systematics of prokaryotes. It focuses on Bacteria and Archaea; eukaryotic microorganisms will only be considered in rare cases. The journal perceives a broad understanding of microbial diversity and encourages the submission of manuscripts from the following branches of microbiology:
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