里夫乌龟(Mauremys reevesii)STAT 家族的全基因组鉴定和表达分析。

IF 1.6 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Yi Song, Zeshuo Zhou, Shichen Huang, Zhiyuan Li, Xuechi Zhu, Hongming Zhou, Yuxin Jiang, Duminda S. B. Dissanayake, Arthur Georges, Lei Xiong
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引用次数: 0

摘要

Stat(转录信号转导和激活因子)基因家族在调节免疫以及各种生物的细胞增殖、分化和凋亡过程中发挥着重要作用。虽然许多哺乳动物的 Stat 基因在免疫中的功能已被广泛记录,但爬行动物的数据却很有限。我们利用系统进化分析在东亚淡水龟 M. reevesii 的基因组中鉴定出了 Stat 家族的八个推定成员(Stat1-1、Stat1-2、Stat2、Stat3、Stat4、Stat5b、Stat6-1 和 Stat6-2)。序列分析表明,Stat基因含有四个保守的结构域蛋白质相互作用结构域、线圈结构域、DNA结合结构域和Src同源结构域2。 此外,Stat1、Stat2和Stat6还含有TAZ2bind、Apolipo_F和TALPID3结构域。服用脂多糖(一种有效的免疫系统激活剂)4、8、12 和 16 小时后,脾组织中 Stat 基因的 mRNA 水平上调。在注射 LPS 12 小时后,Stat5b 的表达与对照组差异最大。免疫荧光验证了Stat5b在脾脏组织细胞中的表达。这些结果表明,Stat5b 在雷韦氏蝇的免疫反应中发挥作用,并可能在未来的研究中被证明是免疫反应的积极标记物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Genome-Wide Identification and Expression Analysis of the STAT Family in Reeve’s Turtle (Mauremys reevesii)

Genome-Wide Identification and Expression Analysis of the STAT Family in Reeve’s Turtle (Mauremys reevesii)

The Stat (signal transducer and activator of transcription) gene family plays a vital role in regulating immunity and the processes of cellular proliferation, differentiation, and apoptosis across diverse organisms. Although the functions of Stat genes in immunity have been extensively documented in many mammals, limited data are available for reptiles. We used phylogenetic analysis to identify eight putative members of the Stat family (Stat1-1, Stat1-2, Stat2, Stat3, Stat4, Stat5b, Stat6-1, and Stat6-2) within the genome of M. reevesii, a freshwater turtle found in East Asia. Sequence analysis showed that the Stat genes contain four conserved structural domains protein interaction domain, coiled-coil domain, DNA-binding domain, and Src homology domain 2. In addition, Stat1, Stat2, and Stat6 contain TAZ2bind, Apolipo_F, and TALPID3 structural domains. The mRNA levels of Stat genes were upregulated in spleen tissues at 4, 8, 12, and 16 h after administration of lipopolysaccharide, a potent activator of the immune system. Stat5b expression at 12-h LPS post-injection exhibited the most substantial difference from the control. The expression of Stat5b in spleen tissue cellular was verified by immunofluorescence. These results suggest that Stat5b plays a role in the immune response of M. reevesii and may prove to be as a positive marker of an immune response in future studies.

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来源期刊
Biochemical Genetics
Biochemical Genetics 生物-生化与分子生物学
CiteScore
3.90
自引率
0.00%
发文量
133
审稿时长
4.8 months
期刊介绍: Biochemical Genetics welcomes original manuscripts that address and test clear scientific hypotheses, are directed to a broad scientific audience, and clearly contribute to the advancement of the field through the use of sound sampling or experimental design, reliable analytical methodologies and robust statistical analyses. Although studies focusing on particular regions and target organisms are welcome, it is not the journal’s goal to publish essentially descriptive studies that provide results with narrow applicability, or are based on very small samples or pseudoreplication. Rather, Biochemical Genetics welcomes review articles that go beyond summarizing previous publications and create added value through the systematic analysis and critique of the current state of knowledge or by conducting meta-analyses. Methodological articles are also within the scope of Biological Genetics, particularly when new laboratory techniques or computational approaches are fully described and thoroughly compared with the existing benchmark methods. Biochemical Genetics welcomes articles on the following topics: Genomics; Proteomics; Population genetics; Phylogenetics; Metagenomics; Microbial genetics; Genetics and evolution of wild and cultivated plants; Animal genetics and evolution; Human genetics and evolution; Genetic disorders; Genetic markers of diseases; Gene technology and therapy; Experimental and analytical methods; Statistical and computational methods.
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