Nor Afiqah Maiden, Safiah Atan, Nusaibah Syd Ali, Khairulmazmi Ahmad, Mui-Yun Wong
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This study isolated a member of the cerato-platanin family from <i>R. microporus</i> and evaluated its expression during <i>H. brasiliensis</i> infection. Total RNA was extracted from the mycelial sample of <i>R. microporus</i> followed by cDNA synthesis, isolation and cloning of the cerato-platanin transcript referred to as <i>rmcp</i>. In silico characterisation of the obtained sequence was then conducted and the relative expression of the gene was evaluated using RT-qPCR. A transcript of 438 bp encoding 145 amino acids protein, denoted as RmCP, was isolated and cloned. RmCP is composed of a cerato-platanin domain and a predicted N-terminal signal peptide. Phylogenetic analysis grouped RmCP into a cluster together with cerato-platanin proteins originating from basidiomycetes. The expression of <i>rmcp</i> gene was consistent throughout the study period and was not significantly different from axenic culture. 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引用次数: 0
摘要
橡胶树(Hevea brasiliensis)很容易受到各种真菌病原体的感染。白根病感染是马来西亚橡胶最普遍的病害之一。这种病是由真菌 Rigidoporus microporus 引起的。如果不及时防治这种病害,会导致橡胶树总株数大幅减少,最终降低土地生产力。利用诱导蛋白来增强寄主植物的抗性是一种可持续的病害控制方法,可减少化学杀菌剂的使用。脑磷脂蛋白家族是报道最多的一类激发蛋白。本研究从 R. microporus 中分离出了 Cerato-platanin 家族的一个成员,并评估了它在 H. brasiliensis 感染期间的表达情况。先从小孢子菌的菌丝样本中提取总 RNA,然后进行 cDNA 合成、分离和克隆被称为 rmcp 的陶瓷platanin 转录本。然后对获得的序列进行了硅特征分析,并使用 RT-qPCR 评估了该基因的相对表达量。分离并克隆出了一个 438 bp 的转录本,编码 145 个氨基酸的蛋白质,称为 RmCP。RmCP 由一个脑磷脂结构域和一个预测的 N 端信号肽组成。系统进化分析将 RmCP 与来自基生真菌的脑磷脂蛋白归为一类。在整个研究期间,rmcp 基因的表达量始终如一,与轴突培养物没有明显差异。这表明该基因在小孢子菌的生命周期中具有基本功能。
The Cerato-Platanin gene, rmcp, from Rigidoporus microporus was stably expressed during infection of Hevea brasiliensis
The rubber tree (Hevea brasiliensis) is vulnerable to infections by various fungal pathogens. White root disease infection is one of the most prevalent diseases of rubber in Malaysia. This disease is caused by the fungus Rigidoporus microporus. Delayed management of this disease can cause considerable reduction in total tree stand and ultimately decreased land productivity. The utilisation of elicitor proteins to heighten host plant resistance represents a sustainable approach to disease control by reducing the use of chemical fungicides. The cerato-platanin protein family is the most widely reported class of elicitor proteins. This study isolated a member of the cerato-platanin family from R. microporus and evaluated its expression during H. brasiliensis infection. Total RNA was extracted from the mycelial sample of R. microporus followed by cDNA synthesis, isolation and cloning of the cerato-platanin transcript referred to as rmcp. In silico characterisation of the obtained sequence was then conducted and the relative expression of the gene was evaluated using RT-qPCR. A transcript of 438 bp encoding 145 amino acids protein, denoted as RmCP, was isolated and cloned. RmCP is composed of a cerato-platanin domain and a predicted N-terminal signal peptide. Phylogenetic analysis grouped RmCP into a cluster together with cerato-platanin proteins originating from basidiomycetes. The expression of rmcp gene was consistent throughout the study period and was not significantly different from axenic culture. This suggests the gene to have a fundamental function in the life cycle of R. microporus.
期刊介绍:
The Journal of Rubber Research is devoted to both natural and synthetic rubbers, as well as to related disciplines. The scope of the journal encompasses all aspects of rubber from the core disciplines of biology, physics and chemistry, as well as economics. As a specialised field, rubber science includes within its niche a vast potential of innovative and value-added research areas yet to be explored. This peer reviewed publication focuses on the results of active experimental research and authoritative reviews on all aspects of rubber science.
The Journal of Rubber Research welcomes research on:
the upstream, including crop management, crop improvement and protection, and biotechnology;
the midstream, including processing and effluent management;
the downstream, including rubber engineering and product design, advanced rubber technology, latex science and technology, and chemistry and materials exploratory;
economics, including the economics of rubber production, consumption, and market analysis.
The Journal of Rubber Research serves to build a collective knowledge base while communicating information and validating the quality of research within the discipline, and bringing together work from experts in rubber science and related disciplines.
Scientists in both academia and industry involved in researching and working with all aspects of rubber will find this journal to be both source of information and a gateway for their own publications.