全面分析树突状细胞标记基因特征以预测肺腺癌的预后和免疫疗法反应

IF 3.2 4区 医学 Q3 IMMUNOLOGY
Peng Song, Yuan Li, Moyan Zhang, Baihan Lyu, Yong Cui, Shugeng Gao
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引用次数: 0

摘要

随着免疫检查点抑制剂(ICIs)的开发,免疫疗法最近已成为癌症治疗的核心。树突状细胞在抗肿瘤免疫中发挥着复杂而重要的功能。本研究旨在构建一种新型树突状细胞标记基因特征(DCMGS),以预测肺腺癌(LUAD)的预后和免疫治疗反应。通过分析单细胞 RNA 测序数据,确定了 LUAD 中的树突状细胞标记基因。从TCGA数据集的训练队列中筛选出6个基因(G0S2、KLF4、ALDH2、IER3、TXN、CD69)作为与预后最相关的基因,用于构建DCMGS。根据总生存时间,按 DCMGS 风险评分将患者分为高危和低危两组。然后,在 6 个独立队列中验证了风险模型的预测能力。多变量分析证实,DCMGS是一个独立的预后因素。此外,我们还进行了通路富集分析,以探索 DCMGS 强大预测能力的可能生物学机制,并展示了免疫细胞浸润图谱和炎症活动,以反映免疫特征。值得注意的是,我们将 DCMGS 与免疫检查点的表达和 TCR/BCR 复合物的多样性联系起来,这可能会影响免疫疗法的反应。最后,DCMGS 对免疫疗法反应的预测能力也通过两个接受过免疫疗法的队列进行了验证。结果显示,DCMGS 风险评分较低的患者预后和免疫治疗反应较好。总之,DCMGS 被认为是 LUAD 有希望的预后指标,也是免疫治疗反应的理想预测指标。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Comprehensive Analysis of a Dendritic Cell Marker Genes Signature to Predict Prognosis and Immunotherapy Response in Lung Adenocarcinoma.

With the development of immune checkpoints inhibitors (ICIs), immunotherapy has recently taken center stage in cancer treatment. Dendritic cells exert complicated and important functions in antitumor immunity. This study aims to construct a novel dendritic cell marker gene signature (DCMGS) to predict the prognosis and immunotherapy response of lung adenocarcinoma (LUAD). DC marker genes in LUAD were identified by analysis of single-cell RNA sequencing data. 6 genes (G0S2, KLF4, ALDH2, IER3, TXN, CD69) were screened as the most prognosis-related genes for constructing DCMGS on a training cohort from TCGA data set. Patients were divided into high-risk and low-risk groups by DCMGS risk score based on overall survival time. Then, the predictive ability of the risk model was validated in 6 independent cohorts. DCMGS was verified to be an independent prognostic factor in multivariate analysis. Furthermore, we performed pathway enrichment analysis to explore possible biological mechanisms of the powerful predictive ability of DCMGS, and immune cell infiltration landscape and inflammatory activities were exhibited to reflect the immune profile. Notably, we bridged DCMGS with expression of immune checkpoints and TCR/BCR repertoire diversity that can inflect immunotherapy response. Finally, the predictive ability of DCMGS in immunotherapy response was also validated by 2 cohorts that had received immunotherapy. As a result, the patients with lower DCMGS risk scores showed a better prognosis and immunotherapy response. In conclusion, DCMGS was suggested to be a promising prognostic indicator for LUAD and a desirable predictor for immunotherapy response.

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来源期刊
Journal of Immunotherapy
Journal of Immunotherapy 医学-免疫学
CiteScore
6.90
自引率
0.00%
发文量
79
审稿时长
6-12 weeks
期刊介绍: Journal of Immunotherapy features rapid publication of articles on immunomodulators, lymphokines, antibodies, cells, and cell products in cancer biology and therapy. Laboratory and preclinical studies, as well as investigative clinical reports, are presented. The journal emphasizes basic mechanisms and methods for the rapid transfer of technology from the laboratory to the clinic. JIT contains full-length articles, review articles, and short communications.
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