VBP1 促进肿瘤增殖,是食管鳞状细胞癌缺氧相关特征的一部分。

IF 4.3 3区 材料科学 Q1 ENGINEERING, ELECTRICAL & ELECTRONIC
ACS Applied Electronic Materials Pub Date : 2024-07-01 Epub Date: 2024-05-03 DOI:10.1007/s13577-024-01068-9
Huikai Miao, Wuyou Gao, Leqi Zhong, Hongmu Li, Dongni Chen, Chunmei Xu, Zhesheng Wen, Youfang Chen
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引用次数: 0

摘要

食管鳞状细胞癌(ESCC)是东亚地区常见的恶性肿瘤。缺氧是实体瘤的一大特征,会显著改变肿瘤微环境中的氧化还原平衡。这种改变会促使肿瘤增殖、侵袭和转移,导致不良预后。然而,人们对缺氧相关基因在 ESCC 中的作用仍知之甚少。我们采用 RNA 测序来鉴定 ESCC 中的差异表达基因。我们从开源数据库中提取了临床数据、转录组图谱和缺氧相关基因集。利用最小绝对收缩和选择算子(LASSO)回归法构建了一个预后模型,然后通过 Cox 回归分析进行了验证。在该预后模型中,我们确定并研究了一个影响预后的关键缺氧相关基因。在食管癌和正常组织中,我们使用实时 PCR 和免疫组化技术验证了该基因的表达。通过体外和体内试验,包括细胞计数试剂盒-8、EdU、集落形成和皮下肿瘤模型,对肿瘤增殖进行了检测。成功构建并验证了一个强大的四基因预后模型(VBP1、BGN、CDKN1A 和 PPFIA1)。其中,VBP1是一个关键基因,它的高表达水平与ESCC的不良预后相关。功能实验证实,VBP1 在体外和体内都能显著加速肿瘤的增殖。VBP1被确定为缺氧相关预后特征中的关键基因,它能显著促进ESCC的肿瘤增殖。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

VBP1 promotes tumor proliferation as a part of the hypoxia-related signature in esophageal squamous cell carcinoma.

VBP1 promotes tumor proliferation as a part of the hypoxia-related signature in esophageal squamous cell carcinoma.

Esophageal squamous cell carcinoma (ESCC) is a common malignant tumor in East Asia. Hypoxia, a hallmark of solid tumors, significantly alters redox homeostasis inside tumor microenvironment. This alteration drives tumor proliferation, invasion, and metastasis, leading to poor prognostic outcomes. However, the role of hypoxia-related genes in ESCC remains poorly understood. We employed RNA sequencing to identify differentially expressed genes in ESCC. Clinical data, transcriptome profiles, and a hypoxia-related gene set were extracted from open-source databases. A prognostic model was constructed using least absolute shrinkage and selection operator (LASSO) regression, which was then validated through Cox regression analysis. Within this prognostic model, we pinpointed and investigated a key hypoxia-related gene affecting prognosis. The gene's expression was validated using real-time PCR and immunohistochemistry in both esophageal carcinoma and normal tissues. Tumor proliferation was examined through in vitro and in vivo assays, including the Cell Counting Kit-8, EdU, colony formation, and subcutaneous tumor models. A robust four-gene prognostic model (VBP1, BGN, CDKN1A, and PPFIA1) was successfully constructed and validated. Among these, VBP1 emerged as a key gene, exhibiting high expression levels that correlated with poor prognosis in ESCC. Functional experiments confirmed that VBP1 significantly accelerated tumor proliferation both in vitro and in vivo. VBP1 is identified as a pivotal gene within the hypoxia-related prognostic signature, and it significantly promotes tumor proliferation in ESCC.

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CiteScore
7.20
自引率
4.30%
发文量
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