Juliet K. Brophy , Gregory J. Matthews , Nicole Schnitzler , Karthik Bharath , Sebastian Kurtek , Ofer Harel
{"title":"利用弹性形状分析法对南非格拉德斯维尔的牛科化石进行分类","authors":"Juliet K. Brophy , Gregory J. Matthews , Nicole Schnitzler , Karthik Bharath , Sebastian Kurtek , Ofer Harel","doi":"10.1016/j.jas.2024.105959","DOIUrl":null,"url":null,"abstract":"<div><p>Teeth from the Family Bovidae that are associated with our early humans ancestors are important for reconstructing paleoenvironments. However, age, degree of attrition, and taphonomic factors often make fossil identification difficult. A recent technique for classifying these teeth uses the size-and-shape of the occlusal surface as a summary of the surface, deriving features from this, and then using these features in machine learning classification algorithms. Bovid teeth have previously been classified using this method with features derived from coefficients of elliptical Fourier analysis (EFA). This study assesses the utility of using other shape representations for feature generation, specifically elastics shape analysis. Features were derived using this frame work for both shape only and size-and-shape (i.e. size is not considered a nuisance parameter), and those features were used as input for machine learning algorithms. We demonstrate that features derived elastic shape analysis generally outperform features derived from EFA in terms of cross validation classification accuracy. Finally, an application of the classification methods studied here was applied to fossils recovered from the deroofed Gladysvale External deposit (GVED), Gauteng Province, South Africa. Previous analyses of GVED identified a group of bovids as medium sized alcelaphines (Lacruz et al., 2002). Specifically, this study reclassified 32 unbroken, medium sized alcelaphines looking at shape and size-and-shape. The reclassifications increased the number of individuals and diversity of bovids recovered from the site. The results were used to generate a more precise paleoenvironmental reconstruction.</p></div>","PeriodicalId":50254,"journal":{"name":"Journal of Archaeological Science","volume":null,"pages":null},"PeriodicalIF":2.6000,"publicationDate":"2024-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Classification of Bovidae fossils from Gladysvale, South Africa using elastic shape analysis\",\"authors\":\"Juliet K. Brophy , Gregory J. Matthews , Nicole Schnitzler , Karthik Bharath , Sebastian Kurtek , Ofer Harel\",\"doi\":\"10.1016/j.jas.2024.105959\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>Teeth from the Family Bovidae that are associated with our early humans ancestors are important for reconstructing paleoenvironments. However, age, degree of attrition, and taphonomic factors often make fossil identification difficult. A recent technique for classifying these teeth uses the size-and-shape of the occlusal surface as a summary of the surface, deriving features from this, and then using these features in machine learning classification algorithms. Bovid teeth have previously been classified using this method with features derived from coefficients of elliptical Fourier analysis (EFA). This study assesses the utility of using other shape representations for feature generation, specifically elastics shape analysis. Features were derived using this frame work for both shape only and size-and-shape (i.e. size is not considered a nuisance parameter), and those features were used as input for machine learning algorithms. We demonstrate that features derived elastic shape analysis generally outperform features derived from EFA in terms of cross validation classification accuracy. Finally, an application of the classification methods studied here was applied to fossils recovered from the deroofed Gladysvale External deposit (GVED), Gauteng Province, South Africa. Previous analyses of GVED identified a group of bovids as medium sized alcelaphines (Lacruz et al., 2002). Specifically, this study reclassified 32 unbroken, medium sized alcelaphines looking at shape and size-and-shape. The reclassifications increased the number of individuals and diversity of bovids recovered from the site. The results were used to generate a more precise paleoenvironmental reconstruction.</p></div>\",\"PeriodicalId\":50254,\"journal\":{\"name\":\"Journal of Archaeological Science\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2024-05-02\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Archaeological Science\",\"FirstCategoryId\":\"89\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0305440324000256\",\"RegionNum\":1,\"RegionCategory\":\"地球科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ANTHROPOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Archaeological Science","FirstCategoryId":"89","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0305440324000256","RegionNum":1,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ANTHROPOLOGY","Score":null,"Total":0}
Classification of Bovidae fossils from Gladysvale, South Africa using elastic shape analysis
Teeth from the Family Bovidae that are associated with our early humans ancestors are important for reconstructing paleoenvironments. However, age, degree of attrition, and taphonomic factors often make fossil identification difficult. A recent technique for classifying these teeth uses the size-and-shape of the occlusal surface as a summary of the surface, deriving features from this, and then using these features in machine learning classification algorithms. Bovid teeth have previously been classified using this method with features derived from coefficients of elliptical Fourier analysis (EFA). This study assesses the utility of using other shape representations for feature generation, specifically elastics shape analysis. Features were derived using this frame work for both shape only and size-and-shape (i.e. size is not considered a nuisance parameter), and those features were used as input for machine learning algorithms. We demonstrate that features derived elastic shape analysis generally outperform features derived from EFA in terms of cross validation classification accuracy. Finally, an application of the classification methods studied here was applied to fossils recovered from the deroofed Gladysvale External deposit (GVED), Gauteng Province, South Africa. Previous analyses of GVED identified a group of bovids as medium sized alcelaphines (Lacruz et al., 2002). Specifically, this study reclassified 32 unbroken, medium sized alcelaphines looking at shape and size-and-shape. The reclassifications increased the number of individuals and diversity of bovids recovered from the site. The results were used to generate a more precise paleoenvironmental reconstruction.
期刊介绍:
The Journal of Archaeological Science is aimed at archaeologists and scientists with particular interests in advancing the development and application of scientific techniques and methodologies to all areas of archaeology. This established monthly journal publishes focus articles, original research papers and major review articles, of wide archaeological significance. The journal provides an international forum for archaeologists and scientists from widely different scientific backgrounds who share a common interest in developing and applying scientific methods to inform major debates through improving the quality and reliability of scientific information derived from archaeological research.