50 种蝾螈基因组序列草案(蝾螈科,两栖类)

R. A. Pyron, S. Pirro, T. Hains, T. J. Colston, Edward A. Myers, Kyle A. O’Connell, David A. Beamer
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引用次数: 0

摘要

我们展示了 10 属 4 科 50 种蝾螈(Urodela)的部分基因组序列。这些序列几乎涵盖了蝾螈基因组大小的整个范围,从 ~14-130GB 不等,其中后者是所有动物基因组中最大的。在此之前,只有三个蝾螈基因组可供使用,分别来自蝾螈科(Ambystomatidae)(一个物种)和蝾螈科(Salamandridae)(两个属两个物种),在此基础上,我们又增加了蝾螈科(Amphiumidae)(一个物种)、蝾螈科(Plethodontidae)(6个属45个物种)、蝾螈科(Proteidae)(一个物种)和海螈科(Sirenidae)(两个属3个物种)。这些数据跨越了约 1.4 亿年的进化分化,目前只有隐鳃鲵科(Cryptobranchidae)、蹄鲵科(Hynobiidae)和蝾螈科(Rhyacotritonidae)没有基因组组装。这些数据将有助于今后在 Urodela 和整个动物界开展更多关于物种和基因组进化的工作。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The Draft Genome Sequences of 50 Salamander species (Caudata, Amphibia)
We present partial genome sequences of 50 salamander species (Urodela) from 10 genera and 4 families. These span nearly the entire range of genome sizes in salamanders, from ~14–130GB, the latter of which is among the largest of all animal genomes. Only three salamander genomes were available to this point, from Ambystomatidae (one species) and Salamandridae (two species from two genera), to which we have added Amphiumidae (one species), Plethodontidae (45 species from 6 genera), Proteidae (one species), and Sirenidae (three species from two genera). These span ~140 million years of evolutionary divergence, leaving only Cryptobranchidae, Hynobiidae, and Rhyacotritonidae as salamander families without genome assemblies. These data should facilitate additional future work on speciation and genome evolution, both within Urodela and across Animalia.
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