{"title":"从一个养鱼场周围的海水中分离出的新型好氧性光营养细菌 Jannaschia pagri sp.","authors":"Koyo Kuwata, Yuki Sato-Takabe, Ryosuke Nakai, Yuya Sugimura, Nozomi Tazato, Tadao Kunihiro, Sho Morohoshi, Mitsunori Iwataki, Koji Hamasaki, Takuhei Shiozaki","doi":"10.1007/s10482-024-01971-z","DOIUrl":null,"url":null,"abstract":"<div><p>The genus <i>Jannaschia</i> is one of the representatives of aerobic anoxygenic phototrophic (AAP) bacteria, which is a strictly aerobic bacterium, producing a photosynthetic pigment bacteriochlorophyll (BChl) <i>a</i>. However, a part of the genus <i>Jannaschia</i> members have not been confirmed the photosynthetic ability. The partly presence of the ability in the genus <i>Jannaschia</i> could suggest the complexity of evolutionary history for anoxygenic photosynthesis in the genus, which is expected as gene loss and/or horizontal gene transfer. Here a novel AAP bacterium designated as strain AI_62<sup>T</sup> (= DSM 115720<sup> T</sup> = NBRC 115938<sup> T</sup>), was isolated from coastal seawater around a fish farm in the Uwa Sea, Japan. Its closest relatives were identified as <i>Jannaschia seohaensis</i> SMK-146<sup> T</sup> (95.6% identity) and <i>J. formosa</i> 12N15<sup>T</sup> (94.6% identity), which have been reported to produce BChl <i>a</i>. The genomic characteristic of strain AI_62<sup>T</sup> clearly showed the possession of the anoxygenic photosynthesis related gene sets. This could be a useful model organism to approach the evolutionary mystery of anoxygenic photosynthesis in the genus <i>Jannaschia</i>. Based on a comprehensive consideration of both phylogenetic and phenotypic characteristics, we propose the classification of a novel species within the genus <i>Jannaschia</i>, designated as <i>Jannaschia pagri</i> sp. nov. The type strain for this newly proposed species is AI_62<sup>T</sup> (= DSM 115720<sup> T</sup> = NBRC 115938<sup> T</sup>).</p></div>","PeriodicalId":50746,"journal":{"name":"Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology","volume":"117 1","pages":""},"PeriodicalIF":1.8000,"publicationDate":"2024-04-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Novel aerobic anoxygenic phototrophic bacterium Jannaschia pagri sp. nov., isolated from seawater around a fish farm\",\"authors\":\"Koyo Kuwata, Yuki Sato-Takabe, Ryosuke Nakai, Yuya Sugimura, Nozomi Tazato, Tadao Kunihiro, Sho Morohoshi, Mitsunori Iwataki, Koji Hamasaki, Takuhei Shiozaki\",\"doi\":\"10.1007/s10482-024-01971-z\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The genus <i>Jannaschia</i> is one of the representatives of aerobic anoxygenic phototrophic (AAP) bacteria, which is a strictly aerobic bacterium, producing a photosynthetic pigment bacteriochlorophyll (BChl) <i>a</i>. However, a part of the genus <i>Jannaschia</i> members have not been confirmed the photosynthetic ability. The partly presence of the ability in the genus <i>Jannaschia</i> could suggest the complexity of evolutionary history for anoxygenic photosynthesis in the genus, which is expected as gene loss and/or horizontal gene transfer. Here a novel AAP bacterium designated as strain AI_62<sup>T</sup> (= DSM 115720<sup> T</sup> = NBRC 115938<sup> T</sup>), was isolated from coastal seawater around a fish farm in the Uwa Sea, Japan. Its closest relatives were identified as <i>Jannaschia seohaensis</i> SMK-146<sup> T</sup> (95.6% identity) and <i>J. formosa</i> 12N15<sup>T</sup> (94.6% identity), which have been reported to produce BChl <i>a</i>. The genomic characteristic of strain AI_62<sup>T</sup> clearly showed the possession of the anoxygenic photosynthesis related gene sets. This could be a useful model organism to approach the evolutionary mystery of anoxygenic photosynthesis in the genus <i>Jannaschia</i>. Based on a comprehensive consideration of both phylogenetic and phenotypic characteristics, we propose the classification of a novel species within the genus <i>Jannaschia</i>, designated as <i>Jannaschia pagri</i> sp. nov. The type strain for this newly proposed species is AI_62<sup>T</sup> (= DSM 115720<sup> T</sup> = NBRC 115938<sup> T</sup>).</p></div>\",\"PeriodicalId\":50746,\"journal\":{\"name\":\"Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology\",\"volume\":\"117 1\",\"pages\":\"\"},\"PeriodicalIF\":1.8000,\"publicationDate\":\"2024-04-24\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s10482-024-01971-z\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology","FirstCategoryId":"99","ListUrlMain":"https://link.springer.com/article/10.1007/s10482-024-01971-z","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Novel aerobic anoxygenic phototrophic bacterium Jannaschia pagri sp. nov., isolated from seawater around a fish farm
The genus Jannaschia is one of the representatives of aerobic anoxygenic phototrophic (AAP) bacteria, which is a strictly aerobic bacterium, producing a photosynthetic pigment bacteriochlorophyll (BChl) a. However, a part of the genus Jannaschia members have not been confirmed the photosynthetic ability. The partly presence of the ability in the genus Jannaschia could suggest the complexity of evolutionary history for anoxygenic photosynthesis in the genus, which is expected as gene loss and/or horizontal gene transfer. Here a novel AAP bacterium designated as strain AI_62T (= DSM 115720 T = NBRC 115938 T), was isolated from coastal seawater around a fish farm in the Uwa Sea, Japan. Its closest relatives were identified as Jannaschia seohaensis SMK-146 T (95.6% identity) and J. formosa 12N15T (94.6% identity), which have been reported to produce BChl a. The genomic characteristic of strain AI_62T clearly showed the possession of the anoxygenic photosynthesis related gene sets. This could be a useful model organism to approach the evolutionary mystery of anoxygenic photosynthesis in the genus Jannaschia. Based on a comprehensive consideration of both phylogenetic and phenotypic characteristics, we propose the classification of a novel species within the genus Jannaschia, designated as Jannaschia pagri sp. nov. The type strain for this newly proposed species is AI_62T (= DSM 115720 T = NBRC 115938 T).
期刊介绍:
Antonie van Leeuwenhoek publishes papers on fundamental and applied aspects of microbiology. Topics of particular interest include: taxonomy, structure & development; biochemistry & molecular biology; physiology & metabolic studies; genetics; ecological studies; especially molecular ecology; marine microbiology; medical microbiology; molecular biological aspects of microbial pathogenesis and bioinformatics.