用于分析福州 COVID-19 大浪的带年龄组和社会接触的 SEIHR 模型

IF 8.8 3区 医学 Q1 Medicine
Xiaomin Lan , Guangmin Chen , Ruiyang Zhou , Kuicheng Zheng , Shaojian Cai , Fengying Wei , Zhen Jin , Xuerong Mao
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引用次数: 0

摘要

背景在COVID-19全球流行期间,总人口的年龄组和社会接触结构影响着感染规模和住院床位需求,尤其影响着严重感染和死亡。2022 年年底前,中国政府在全国范围内实施了疫苗接种,并在全国范围内建立了群体免疫力,同时还公布了《二十条措施》(11 月 11 日)和《新十条措施》(12 月 7 日),以进一步改变中国大陆零 COVID 的动态政体。在全国范围内接种疫苗并修改措施的背景下,福建省出现了以 Omicron BA.5.2 变种为首的福州 COVID-19 大流行(2022 年 11 月 19 日-2023 年 2 月 9 日),并持续了三个月。主要目的是评估年龄组和社会接触对总人口的影响。根据福建省疾病预防控制中心(福建疾控中心)的监测数据,采用最小二乘法对四个年龄组的数据进行配对。采用下一代矩阵法计算总人口和特定年龄组的基本繁殖数。利用 Epiestim R 软件包和 SEIHR 模型绘制了四个年龄组的有效繁殖数趋势图,并进行了深入讨论。结果本研究对多年龄组 SEIHR 模型的基本繁殖数、有效繁殖数和敏感性分析等主要流行病学特征进行了广泛讨论。首先,通过下一代矩阵法,利用福州 COVID-19 大浪四个年龄组的参数值估算出总人口的基本繁殖数 R0 为 1.57。在给定年龄组 k 的情况下,还估算了 R0k 值(年龄组 k 对年龄组 k 的影响)、R0k 值(年龄组 k 对总人口的影响)和 R^0k 值(总人口对年龄组 k 的影响),其中对年龄组影响的探讨表明 R0k>R0k>R^0k 的关系是有效的。然后,利用两种方法(监测数据和 SEIHR 模型)对福州 COVID-19 大潮的有效繁殖数 Rt 的波动趋势进行了论证,其中高危人群(G4 组)由于对感染的高敏感性和对基础疾病的高风险,主要对感染规模做出了贡献。此外,使用两种方法(敏感性指数和 PRCC 值)进行的敏感性分析表明,年龄组的感染易感性起着至关重要的作用,而数值模拟表明,感染规模随年龄组社会接触的变化而变化。本研究结果表明,地方政府关注的总人口中的高危人群对 COVID-19 感染的易感性最高。减少社会接触和为高危人群提供足够的病床有利于控制 COVID-19 的传播。为避免未来出现针对新变种的医疗运行,建议地方政府的决策者在医院床位有限的情况下减少社会接触。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
An SEIHR model with age group and social contact for analysis of Fuzhou COVID-19 large wave

Background

The structure of age groups and social contacts of the total population influenced infection scales and hospital-bed requirements, especially influenced severe infections and deaths during the global prevalence of COVID-19. Before the end of the year 2022, Chinese government implemented the national vaccination and had built the herd immunity cross the country, and announced Twenty Measures (November 11) and Ten New Measures (December 7) for further modifications of dynamic zero-COVID polity on the Chinese mainland. With the nation-wide vaccination and modified measures background, Fuzhou COVID-19 large wave (November 19, 2022–February 9, 2023) led by Omicron BA.5.2 variant was recorded and prevailed for three months in Fujian Province.

Methods

A multi-age groups susceptible-exposed-infected-hospitalized-recovered (SEIHR) COVID-19 model with social contacts was proposed in this study. The main object was to evaluate the impacts of age groups and social contacts of the total population. The idea of Least Squares method was governed to perform the data fittings of four age groups against the surveillance data from Fujian Provincial Center for Disease Control and Prevention (Fujian CDC). The next generation matrix method was used to compute basic reproduction number for the total population and for the specific age group. The tendencies of effective reproduction number of four age groups were plotted by using the Epiestim R package and the SEIHR model for in-depth discussions. The sensitivity analysis by using sensitivity index and partial rank correlation coefficients values (PRCC values) were operated to reveal the differences of age groups against the main parameters.

Results

The main epidemiological features such as basic reproduction number, effective reproduction number and sensitivity analysis were extensively discussed for multi-age groups SEIHR model in this study. Firstly, by using of the next generation matrix method, basic reproduction number R0 of the total population was estimated as 1.57 using parameter values of four age groups of Fuzhou COVID-19 large wave. Given age group k, the values of R0k (age group k to age group k), the values of R0k (an infected of age group k to the total population) and the values of R^0k (an infected of the total population to age group k) were also estimated, in which the explorations of the impacts of age groups revealed that the relationship R0k>R0k>R^0k was valid. Then, the fluctuating tendencies of effective reproduction number Rt were demonstrated by using two approaches (the surveillance data and the SEIHR model) for Fuzhou COVID-19 large wave, during which high-risk group (G4 group) mainly contributed the infection scale due to high susceptibility to infection and high risks to basic diseases. Further, the sensitivity analysis using two approaches (the sensitivity index and the PRCC values) revealed that susceptibility to infection of age groups played the vital roles, while the numerical simulation showed that infection scale varied with the changes of social contacts of age groups. The results of this study claimed that the high-risk group out of the total population was concerned by the local government with the highest susceptibility to infection against COVID-19.

Conclusions

This study verified that the partition structure of age groups of the total population, the susceptibility to infection of age groups, the social contacts among age groups were the important contributors of infection scale. The less social contacts and adequate hospital beds for high-risk group were profitable to control the spread of COVID-19. To avoid the emergence of medical runs against new variant in the future, the policymakers from local government were suggested to decline social contacts when hospital beds were limited.

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来源期刊
Infectious Disease Modelling
Infectious Disease Modelling Mathematics-Applied Mathematics
CiteScore
17.00
自引率
3.40%
发文量
73
审稿时长
17 weeks
期刊介绍: Infectious Disease Modelling is an open access journal that undergoes peer-review. Its main objective is to facilitate research that combines mathematical modelling, retrieval and analysis of infection disease data, and public health decision support. The journal actively encourages original research that improves this interface, as well as review articles that highlight innovative methodologies relevant to data collection, informatics, and policy making in the field of public health.
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