从韩国传统发酵海鲜 Jeotgal 中分离出的 Sporosarcina jeotgali sp.

IF 3.3 4区 生物学 Q2 MICROBIOLOGY
Ah-In Yang, Bora Kim, Sung-Hong Joe, Hae-In Joe, Hanna Choe, Ki Hyun Kim, Min Ok Jun, Na-Ri Shin
{"title":"从韩国传统发酵海鲜 Jeotgal 中分离出的 Sporosarcina jeotgali sp.","authors":"Ah-In Yang, Bora Kim, Sung-Hong Joe, Hae-In Joe, Hanna Choe, Ki Hyun Kim, Min Ok Jun, Na-Ri Shin","doi":"10.1007/s12275-024-00106-3","DOIUrl":null,"url":null,"abstract":"<p>Three novel, Gram-stain-positive, obligate aerobic, catalase- and oxidase-positive bacterial strains, designated B2O-1<sup>T</sup>, T2O-4<sup>T</sup>, and 0.2-SM1T-5<sup>T</sup>, were isolated from jeotgal, a traditional Korean fermented seafood. Strains B2O-1<sup>T</sup>, T2O-4<sup>T</sup>, and 0.2-SM1T-5<sup>T</sup> exhibited distinct colony colors, characterized by pink, yellow, and red opaque circular colonies, respectively. Phylogenetic analysis revealed that three strains formed a paraphyletic clade within the genus <i>Sporosarcina</i> and shared &lt; 99.0% similarity with <i>Sporosarcina aquimarina</i> KCTC 3840<sup>T</sup> and <i>Sporosarcina saromensis</i> KCTC 13119<sup>T</sup> in their 16S rRNA gene sequences. The three strains exhibiting Orthologous Average Nucleotide Identity values &lt; 79.3% and digital DNA-DNA hybridization values &lt; 23.1% within the genus <i>Sporosarcina</i> affirmed their distinctiveness. Strains B2O-1<sup>T</sup>, T2O-4<sup>T</sup>, and 0.2-SM1T-5<sup>T</sup> contained MK-7 as a sole respiratory menaquinone and A4<i>α</i> type peptidoglycan based on lysine with alanine, glutamic acid, and aspartic acid. The common polar lipids include diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine. Strain T2O-4<sup>T</sup> contained one unidentified phospholipid, whereas strain 0.2-SM1T-5<sup>T</sup> contained two unidentified phospholipids. Cellular fatty acid profiles, with C<sub>15:0</sub> anteiso as the major fatty acid, supported the affiliation of the three strains to the genus <i>Sporosarcina</i>. Based on the polyphasic characteristics, strains B2O-1<sup>T</sup> (= KCTC 43506<sup>T</sup> = JCM 36032<sup>T</sup>), T2O-4<sup>T</sup> (= KCTC 43489<sup>T</sup> = JCM 36031<sup>T</sup>), and 0.2-SM1T-5<sup>T</sup> (= KCTC 43519<sup>T</sup> = JCM 36034<sup>T</sup>) represent three novel species within the genus <i>Sporosarcina</i>, named <i>Sporosarcina jeotgali</i> sp. nov., <i>Sporosarcina oncorhynchi</i> sp. nov., and <i>Sporosarcina trichiuri</i> sp. nov., respectively.</p>","PeriodicalId":16546,"journal":{"name":"Journal of Microbiology","volume":"13 1","pages":""},"PeriodicalIF":3.3000,"publicationDate":"2024-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Sporosarcina jeotgali sp. nov., Sporosarcina oncorhynchi sp. nov., and Sporosarcina trichiuri sp. nov., Isolated from Jeotgal, a Traditional Korean Fermented Seafood\",\"authors\":\"Ah-In Yang, Bora Kim, Sung-Hong Joe, Hae-In Joe, Hanna Choe, Ki Hyun Kim, Min Ok Jun, Na-Ri Shin\",\"doi\":\"10.1007/s12275-024-00106-3\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Three novel, Gram-stain-positive, obligate aerobic, catalase- and oxidase-positive bacterial strains, designated B2O-1<sup>T</sup>, T2O-4<sup>T</sup>, and 0.2-SM1T-5<sup>T</sup>, were isolated from jeotgal, a traditional Korean fermented seafood. Strains B2O-1<sup>T</sup>, T2O-4<sup>T</sup>, and 0.2-SM1T-5<sup>T</sup> exhibited distinct colony colors, characterized by pink, yellow, and red opaque circular colonies, respectively. Phylogenetic analysis revealed that three strains formed a paraphyletic clade within the genus <i>Sporosarcina</i> and shared &lt; 99.0% similarity with <i>Sporosarcina aquimarina</i> KCTC 3840<sup>T</sup> and <i>Sporosarcina saromensis</i> KCTC 13119<sup>T</sup> in their 16S rRNA gene sequences. The three strains exhibiting Orthologous Average Nucleotide Identity values &lt; 79.3% and digital DNA-DNA hybridization values &lt; 23.1% within the genus <i>Sporosarcina</i> affirmed their distinctiveness. Strains B2O-1<sup>T</sup>, T2O-4<sup>T</sup>, and 0.2-SM1T-5<sup>T</sup> contained MK-7 as a sole respiratory menaquinone and A4<i>α</i> type peptidoglycan based on lysine with alanine, glutamic acid, and aspartic acid. The common polar lipids include diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine. Strain T2O-4<sup>T</sup> contained one unidentified phospholipid, whereas strain 0.2-SM1T-5<sup>T</sup> contained two unidentified phospholipids. Cellular fatty acid profiles, with C<sub>15:0</sub> anteiso as the major fatty acid, supported the affiliation of the three strains to the genus <i>Sporosarcina</i>. Based on the polyphasic characteristics, strains B2O-1<sup>T</sup> (= KCTC 43506<sup>T</sup> = JCM 36032<sup>T</sup>), T2O-4<sup>T</sup> (= KCTC 43489<sup>T</sup> = JCM 36031<sup>T</sup>), and 0.2-SM1T-5<sup>T</sup> (= KCTC 43519<sup>T</sup> = JCM 36034<sup>T</sup>) represent three novel species within the genus <i>Sporosarcina</i>, named <i>Sporosarcina jeotgali</i> sp. nov., <i>Sporosarcina oncorhynchi</i> sp. nov., and <i>Sporosarcina trichiuri</i> sp. nov., respectively.</p>\",\"PeriodicalId\":16546,\"journal\":{\"name\":\"Journal of Microbiology\",\"volume\":\"13 1\",\"pages\":\"\"},\"PeriodicalIF\":3.3000,\"publicationDate\":\"2024-04-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1007/s12275-024-00106-3\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Microbiology","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1007/s12275-024-00106-3","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

研究人员从韩国传统发酵海产品 "獐牙菜 "中分离出三种新型革兰氏染色阳性、需氧、催化酶和氧化酶阳性细菌菌株,分别命名为 B2O-1T、T2O-4T 和 0.2-SM1T-5T。菌株 B2O-1T、T2O-4T 和 0.2-SM1T-5T 表现出不同的菌落颜色,分别为粉红色、黄色和红色不透明圆形菌落。系统进化分析表明,这三个菌株在 Sporosarcina 属中形成一个旁系支系,其 16S rRNA 基因序列与 Sporosarcina aquimarina KCTC 3840T 和 Sporosarcina saromensis KCTC 13119T 的相似度为 99.0%。这三个菌株在 Sporosarcina 属中的平均核苷酸同源性(Orthologous Average Nucleotide Identity)为 79.3%,数字 DNA-DNA 杂交值(Digital DNA-DNA hybridization)为 23.1%,这证实了它们的独特性。菌株 B2O-1T、T2O-4T 和 0.2-SM1T-5T 含有 MK-7 作为唯一的呼吸脑醌和以赖氨酸为基础的 A4α 型肽聚糖与丙氨酸、谷氨酸和天冬氨酸。常见的极性脂质包括二磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺。菌株 T2O-4T 含有一种不明磷脂,而菌株 0.2-SM1T-5T 含有两种不明磷脂。以 C15:0 anteiso 为主要脂肪酸的细胞脂肪酸图谱支持将这三个菌株归入孢子丝菌属。根据多相特征,菌株B2O-1T(= KCTC 43506T = JCM 36032T)、T2O-4T(= KCTC 43489T = JCM 36031T)和0.2-SM1T-5T(= KCTC 43519T = JCM 36034T)代表了Sporosarcina属中的三个新种,命名为Sporosarcina jeotgali sp、和 Sporosarcina trichiuri sp.
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Sporosarcina jeotgali sp. nov., Sporosarcina oncorhynchi sp. nov., and Sporosarcina trichiuri sp. nov., Isolated from Jeotgal, a Traditional Korean Fermented Seafood

Sporosarcina jeotgali sp. nov., Sporosarcina oncorhynchi sp. nov., and Sporosarcina trichiuri sp. nov., Isolated from Jeotgal, a Traditional Korean Fermented Seafood

Three novel, Gram-stain-positive, obligate aerobic, catalase- and oxidase-positive bacterial strains, designated B2O-1T, T2O-4T, and 0.2-SM1T-5T, were isolated from jeotgal, a traditional Korean fermented seafood. Strains B2O-1T, T2O-4T, and 0.2-SM1T-5T exhibited distinct colony colors, characterized by pink, yellow, and red opaque circular colonies, respectively. Phylogenetic analysis revealed that three strains formed a paraphyletic clade within the genus Sporosarcina and shared < 99.0% similarity with Sporosarcina aquimarina KCTC 3840T and Sporosarcina saromensis KCTC 13119T in their 16S rRNA gene sequences. The three strains exhibiting Orthologous Average Nucleotide Identity values < 79.3% and digital DNA-DNA hybridization values < 23.1% within the genus Sporosarcina affirmed their distinctiveness. Strains B2O-1T, T2O-4T, and 0.2-SM1T-5T contained MK-7 as a sole respiratory menaquinone and A4α type peptidoglycan based on lysine with alanine, glutamic acid, and aspartic acid. The common polar lipids include diphosphatidylglycerol, phosphatidylglycerol, and phosphatidylethanolamine. Strain T2O-4T contained one unidentified phospholipid, whereas strain 0.2-SM1T-5T contained two unidentified phospholipids. Cellular fatty acid profiles, with C15:0 anteiso as the major fatty acid, supported the affiliation of the three strains to the genus Sporosarcina. Based on the polyphasic characteristics, strains B2O-1T (= KCTC 43506T = JCM 36032T), T2O-4T (= KCTC 43489T = JCM 36031T), and 0.2-SM1T-5T (= KCTC 43519T = JCM 36034T) represent three novel species within the genus Sporosarcina, named Sporosarcina jeotgali sp. nov., Sporosarcina oncorhynchi sp. nov., and Sporosarcina trichiuri sp. nov., respectively.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Journal of Microbiology
Journal of Microbiology 生物-微生物学
CiteScore
5.70
自引率
3.30%
发文量
0
审稿时长
3 months
期刊介绍: Publishes papers that deal with research on microorganisms, including archaea, bacteria, yeasts, fungi, microalgae, protozoa, and simple eukaryotic microorganisms. Topics considered for publication include Microbial Systematics, Evolutionary Microbiology, Microbial Ecology, Environmental Microbiology, Microbial Genetics, Genomics, Molecular Biology, Microbial Physiology, Biochemistry, Microbial Pathogenesis, Host-Microbe Interaction, Systems Microbiology, Synthetic Microbiology, Bioinformatics and Virology. Manuscripts dealing with simple identification of microorganism(s), cloning of a known gene and its expression in a microbial host, and clinical statistics will not be considered for publication by JM.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信