Beihan Chen, Mingzhe Zhang, Dan Lin, Jianing Ye, Kai Tang
{"title":"Roseihalotalea indica gen.","authors":"Beihan Chen, Mingzhe Zhang, Dan Lin, Jianing Ye, Kai Tang","doi":"10.1007/s10482-024-01965-x","DOIUrl":null,"url":null,"abstract":"<div><p>The pink-colored and strictly aerobic bacterium strain, designated as TK19036<sup>T</sup>, was isolated from mesopelagic layer of the Southwest Indian Ocean. This novel isolate can grow at 10–45 °C (optimum, 30 °C), pH 6.0–8.0 (optimum, pH 7.0), and 2–14% NaCl concentrations (w/v) (optimum, 6%). The predominant respiratory quinone was Menaquinone-7. Major polar lipid profiles contained two aminolipids, aminophospholipid, two glycolipids, phosphatidylethanolamine, and three unknown polar lipids. The preponderant cellular fatty acids were iso-C<sub>15:0</sub>, C<sub>16:1</sub> <i>ω</i>5<i>c</i> and iso-C<sub>17:0</sub> 3-OH. Phylogenetic analyses based on 16S rRNA gene sequence uncovered that the strain TK19036<sup>T</sup> pertained to the family <i>Catalinimonadaceae</i> under phylum <i>Bacteroidota</i>, and formed a distinct lineage with the closed species <i>Tunicatimonas pelagia</i> NBRC 107804<sup>T</sup>. The up-to-bacteria-core gene phylogenetic trees also demonstrated a deep and novel branch formed by the strain TK19036<sup>T</sup> within the family <i>Catalinimonadaceae</i>. Based on chemotaxonomic, phylogenetic and genomic features presented above, strain TK19036<sup>T</sup> represents a novel species from a novel genus of the family <i>Catalinimonadaceae</i>, for which the name <i>Roseihalotalea indica</i> gen. nov. sp. nov. is proposed. The type strain is TK19036<sup>T</sup> (= CGMCC 1.18940<sup>T</sup> = NBRC 116371<sup>T</sup>).</p></div>","PeriodicalId":50746,"journal":{"name":"Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology","volume":"117 1","pages":""},"PeriodicalIF":1.8000,"publicationDate":"2024-04-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Roseihalotalea indica gen. nov., sp. nov., a halophilic Bacteroidetes from mesopelagic Southwest Indian Ocean with higher carbohydrate metabolic potential\",\"authors\":\"Beihan Chen, Mingzhe Zhang, Dan Lin, Jianing Ye, Kai Tang\",\"doi\":\"10.1007/s10482-024-01965-x\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The pink-colored and strictly aerobic bacterium strain, designated as TK19036<sup>T</sup>, was isolated from mesopelagic layer of the Southwest Indian Ocean. This novel isolate can grow at 10–45 °C (optimum, 30 °C), pH 6.0–8.0 (optimum, pH 7.0), and 2–14% NaCl concentrations (w/v) (optimum, 6%). The predominant respiratory quinone was Menaquinone-7. Major polar lipid profiles contained two aminolipids, aminophospholipid, two glycolipids, phosphatidylethanolamine, and three unknown polar lipids. The preponderant cellular fatty acids were iso-C<sub>15:0</sub>, C<sub>16:1</sub> <i>ω</i>5<i>c</i> and iso-C<sub>17:0</sub> 3-OH. Phylogenetic analyses based on 16S rRNA gene sequence uncovered that the strain TK19036<sup>T</sup> pertained to the family <i>Catalinimonadaceae</i> under phylum <i>Bacteroidota</i>, and formed a distinct lineage with the closed species <i>Tunicatimonas pelagia</i> NBRC 107804<sup>T</sup>. The up-to-bacteria-core gene phylogenetic trees also demonstrated a deep and novel branch formed by the strain TK19036<sup>T</sup> within the family <i>Catalinimonadaceae</i>. Based on chemotaxonomic, phylogenetic and genomic features presented above, strain TK19036<sup>T</sup> represents a novel species from a novel genus of the family <i>Catalinimonadaceae</i>, for which the name <i>Roseihalotalea indica</i> gen. nov. sp. nov. is proposed. The type strain is TK19036<sup>T</sup> (= CGMCC 1.18940<sup>T</sup> = NBRC 116371<sup>T</sup>).</p></div>\",\"PeriodicalId\":50746,\"journal\":{\"name\":\"Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology\",\"volume\":\"117 1\",\"pages\":\"\"},\"PeriodicalIF\":1.8000,\"publicationDate\":\"2024-04-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s10482-024-01965-x\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Antonie Van Leeuwenhoek International Journal of General and Molecular Microbiology","FirstCategoryId":"99","ListUrlMain":"https://link.springer.com/article/10.1007/s10482-024-01965-x","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"MICROBIOLOGY","Score":null,"Total":0}
Roseihalotalea indica gen. nov., sp. nov., a halophilic Bacteroidetes from mesopelagic Southwest Indian Ocean with higher carbohydrate metabolic potential
The pink-colored and strictly aerobic bacterium strain, designated as TK19036T, was isolated from mesopelagic layer of the Southwest Indian Ocean. This novel isolate can grow at 10–45 °C (optimum, 30 °C), pH 6.0–8.0 (optimum, pH 7.0), and 2–14% NaCl concentrations (w/v) (optimum, 6%). The predominant respiratory quinone was Menaquinone-7. Major polar lipid profiles contained two aminolipids, aminophospholipid, two glycolipids, phosphatidylethanolamine, and three unknown polar lipids. The preponderant cellular fatty acids were iso-C15:0, C16:1ω5c and iso-C17:0 3-OH. Phylogenetic analyses based on 16S rRNA gene sequence uncovered that the strain TK19036T pertained to the family Catalinimonadaceae under phylum Bacteroidota, and formed a distinct lineage with the closed species Tunicatimonas pelagia NBRC 107804T. The up-to-bacteria-core gene phylogenetic trees also demonstrated a deep and novel branch formed by the strain TK19036T within the family Catalinimonadaceae. Based on chemotaxonomic, phylogenetic and genomic features presented above, strain TK19036T represents a novel species from a novel genus of the family Catalinimonadaceae, for which the name Roseihalotalea indica gen. nov. sp. nov. is proposed. The type strain is TK19036T (= CGMCC 1.18940T = NBRC 116371T).
期刊介绍:
Antonie van Leeuwenhoek publishes papers on fundamental and applied aspects of microbiology. Topics of particular interest include: taxonomy, structure & development; biochemistry & molecular biology; physiology & metabolic studies; genetics; ecological studies; especially molecular ecology; marine microbiology; medical microbiology; molecular biological aspects of microbial pathogenesis and bioinformatics.