生姜成分对 SARS-CoV-2 病毒的作用:治疗和理论方法

IF 2 Q3 INFECTIOUS DISEASES
Mustafa M. Kadhim , Anees A. Khadom , Jawad Kadhim Abaies , Wesam R. Kadhum , Safa K. Hachim
{"title":"生姜成分对 SARS-CoV-2 病毒的作用:治疗和理论方法","authors":"Mustafa M. Kadhim ,&nbsp;Anees A. Khadom ,&nbsp;Jawad Kadhim Abaies ,&nbsp;Wesam R. Kadhum ,&nbsp;Safa K. Hachim","doi":"10.1016/j.parepi.2024.e00347","DOIUrl":null,"url":null,"abstract":"<div><p>In the present research, ginger extracted compounds, namely; Gingerol {(1-[4′-hydroxy-3′-methoxyphenyl]-5-hydroxy-3-decanone} (1), Zingerone {(4-(4-Hydroxy-3-methoxyphenyl)-2-butanone)} (2), and Shogoals {(E)-1-(4-Hydroxy-3- methoxyphenyl) dec-4-en-3-one)} (3) have been investigated as SARS-Cov-2 inhibitors. The interaction of extracted compounds with the virus's spikes may restrict the virus's reproduction or give time to the body's immune system to detect viruses, consequently producing appropriate antibodies. Gaussian 09 with a 6-311G (d, p) basis set, UCA FUKUI, MGL implement, DSV, and LigPlus software were utilized. The active sites for adsorption were identified using the total electron density (TED), FUKUI function, and Millikan charges. Furthermore, docking analysis clearly showed that the inhibition of viral replication depends on binding energy (Eb) and ligand efficiency (LE). A docking study revealed that the inhibition ability of the studied compounds on SARS-CoV-2 was in the order of 2 &gt; 3 &gt; 1.</p></div>","PeriodicalId":37873,"journal":{"name":"Parasite Epidemiology and Control","volume":"25 ","pages":"Article e00347"},"PeriodicalIF":2.0000,"publicationDate":"2024-04-08","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S2405673124000114/pdfft?md5=c1dcf3af193f943655866bdfd807baed&pid=1-s2.0-S2405673124000114-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Performance of ginger constituents against SARS-CoV-2 virus: A therapeutic and theoretical approach\",\"authors\":\"Mustafa M. Kadhim ,&nbsp;Anees A. Khadom ,&nbsp;Jawad Kadhim Abaies ,&nbsp;Wesam R. Kadhum ,&nbsp;Safa K. Hachim\",\"doi\":\"10.1016/j.parepi.2024.e00347\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>In the present research, ginger extracted compounds, namely; Gingerol {(1-[4′-hydroxy-3′-methoxyphenyl]-5-hydroxy-3-decanone} (1), Zingerone {(4-(4-Hydroxy-3-methoxyphenyl)-2-butanone)} (2), and Shogoals {(E)-1-(4-Hydroxy-3- methoxyphenyl) dec-4-en-3-one)} (3) have been investigated as SARS-Cov-2 inhibitors. The interaction of extracted compounds with the virus's spikes may restrict the virus's reproduction or give time to the body's immune system to detect viruses, consequently producing appropriate antibodies. Gaussian 09 with a 6-311G (d, p) basis set, UCA FUKUI, MGL implement, DSV, and LigPlus software were utilized. The active sites for adsorption were identified using the total electron density (TED), FUKUI function, and Millikan charges. Furthermore, docking analysis clearly showed that the inhibition of viral replication depends on binding energy (Eb) and ligand efficiency (LE). A docking study revealed that the inhibition ability of the studied compounds on SARS-CoV-2 was in the order of 2 &gt; 3 &gt; 1.</p></div>\",\"PeriodicalId\":37873,\"journal\":{\"name\":\"Parasite Epidemiology and Control\",\"volume\":\"25 \",\"pages\":\"Article e00347\"},\"PeriodicalIF\":2.0000,\"publicationDate\":\"2024-04-08\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S2405673124000114/pdfft?md5=c1dcf3af193f943655866bdfd807baed&pid=1-s2.0-S2405673124000114-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Parasite Epidemiology and Control\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2405673124000114\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"INFECTIOUS DISEASES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Parasite Epidemiology and Control","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2405673124000114","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
引用次数: 0

摘要

(1)、Zingerone {(4-(4-羟基-3-甲氧基苯基)-2-丁酮)} (2)和 Shogoals {(E)-1-(4- 羟基-3-甲氧基苯基)癸-4-烯-3-酮)} (3) 作为 SARS-Cov-2 抑制剂进行了研究。提取的化合物与病毒尖峰的相互作用可能会限制病毒的繁殖,或给人体免疫系统检测病毒的时间,从而产生适当的抗体。研究使用了具有 6-311G (d, p) 基集的高斯 09、UCA FUKUI、MGL implement、DSV 和 LigPlus 软件。利用总电子密度(TED)、FUKUI 函数和 Millikan 电荷确定了吸附的活性位点。此外,对接分析清楚地表明,对病毒复制的抑制作用取决于结合能(Eb)和配体效率(LE)。对接研究表明,所研究的化合物对 SARS-CoV-2 的抑制能力依次为 2 > 3 > 1。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Performance of ginger constituents against SARS-CoV-2 virus: A therapeutic and theoretical approach

In the present research, ginger extracted compounds, namely; Gingerol {(1-[4′-hydroxy-3′-methoxyphenyl]-5-hydroxy-3-decanone} (1), Zingerone {(4-(4-Hydroxy-3-methoxyphenyl)-2-butanone)} (2), and Shogoals {(E)-1-(4-Hydroxy-3- methoxyphenyl) dec-4-en-3-one)} (3) have been investigated as SARS-Cov-2 inhibitors. The interaction of extracted compounds with the virus's spikes may restrict the virus's reproduction or give time to the body's immune system to detect viruses, consequently producing appropriate antibodies. Gaussian 09 with a 6-311G (d, p) basis set, UCA FUKUI, MGL implement, DSV, and LigPlus software were utilized. The active sites for adsorption were identified using the total electron density (TED), FUKUI function, and Millikan charges. Furthermore, docking analysis clearly showed that the inhibition of viral replication depends on binding energy (Eb) and ligand efficiency (LE). A docking study revealed that the inhibition ability of the studied compounds on SARS-CoV-2 was in the order of 2 > 3 > 1.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Parasite Epidemiology and Control
Parasite Epidemiology and Control Medicine-Infectious Diseases
CiteScore
5.70
自引率
3.10%
发文量
44
审稿时长
17 weeks
期刊介绍: Parasite Epidemiology and Control is an Open Access journal. There is an increasing amount of research in the parasitology area that analyses the patterns, causes, and effects of health and disease conditions in defined populations. This epidemiology of parasite infectious diseases is predominantly studied in human populations but also spans other major hosts of parasitic infections and as such this journal will have a broad remit. We will focus on the major areas of epidemiological study including disease etiology, disease surveillance, drug resistance and geographical spread and screening, biomonitoring, and comparisons of treatment effects in clinical trials for both human and other animals. We will also look at the epidemiology and control of vector insects. The journal will also cover the use of geographic information systems (Epi-GIS) for epidemiological surveillance which is a rapidly growing area of research in infectious diseases. Molecular epidemiological approaches are also particularly encouraged.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信