多适应病原体在空间异质环境中的进化与传播

IF 4.3 3区 材料科学 Q1 ENGINEERING, ELECTRICAL & ELECTRONIC
Q. Griette, Matthieu Alfaro, G. Raoul, Sylvain Gandon
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引用次数: 0

摘要

病原体对多重选择压力的适应性挑战了我们控制其传播的能力。在这里,我们分析了病原体在异质宿主种群中传播的进化动态,在该种群中,选择在空间上呈周期性变化。我们既研究了疫情前沿的瞬时动态,也研究了疫情后方的长期演化。我们确定了在不同的空间异质性水平和不同的适应成本下产生的五种流行病特征。特别是,我们确定了在哪些条件下,携带多种适应性的普通病原体可以超越由专科病原体组成的联盟。我们还表明,有限的宿主种群会促进普通病原体的传播,因为人口随机性会加剧局部适应不良病原体的灭绝。但是,基因型之间较高的突变率可以挽救专科病原体的联盟,并在中等空间异质性水平下加速流行病的传播。我们的研究全面分析了迁移、局部选择、突变和遗传漂变之间的相互作用对病原体在异质环境中传播和进化的影响。这项工作拓展了我们对两种专科策略和一种通科策略(单一适应与多重适应病原体)之间竞争结果的基本认识。这些结果对于在农业和公共卫生领域针对多适应病原体设计更持久的控制策略具有实际意义。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Evolution and spread of multiadapted pathogens in a spatially heterogeneous environment
Pathogen adaptation to multiple selective pressures challenges our ability to control their spread. Here we analyze the evolutionary dynamics of pathogens spreading in a heterogeneous host population where selection varies periodically in space. We study both the transient dynamics taking place at the front of the epidemic and the long-term evolution far behind the front. We identify five types of epidemic profiles arising for different levels of spatial heterogeneity and different costs of adaptation. In particular, we identify the conditions where a generalist pathogen carrying multiple adaptations can outrace a coalition of specialist pathogens. We also show that finite host populations promote the spread of generalist pathogens because demographic stochasticity enhances the extinction of locally maladapted pathogens. But higher mutation rates between genotypes can rescue the coalition of specialists and speed up the spread of epidemics for intermediate levels of spatial heterogeneity. Our work provides a comprehensive analysis of the interplay between migration, local selection, mutation, and genetic drift on the spread and on the evolution of pathogens in heterogeneous environments. This work extends our fundamental understanding of the outcome of the competition between two specialists and a generalist strategy (single- vs. multiadapted pathogens). These results have practical implications for the design of more durable control strategies against multiadapted pathogens in agriculture and in public health.
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来源期刊
CiteScore
7.20
自引率
4.30%
发文量
567
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