Vijay Bahadur, J. Malik, G. Kumar, Sunil Kumar, Gyan Singh, V. Siroliya
{"title":"九重葛抗 Mtorc1 蛋白治疗糖尿病肾病的基于分子对接的预测性研究:网络药理学","authors":"Vijay Bahadur, J. Malik, G. Kumar, Sunil Kumar, Gyan Singh, V. Siroliya","doi":"10.36348/sijtcm.2024.v07i02.002","DOIUrl":null,"url":null,"abstract":"Background: The decline in kidney function experienced by people with type 1 and type 2 diabetes who are chronically ill is known as diabetic nephropathy (DN) or diabetic kidney disease. The condition is known to progress in a number of stages and is related to blood pressure and glycemic management. Nevertheless, despite strict blood sugar management, the prevalence of chronic kidney disease (CKD) in diabetic patients has not decreased over the past 20 years, which has led to the discovery of new risk factors for the illness's development. The medical characteristics of the Paper Flower, Bougainvillea spectabilis, include anti-inflammatory, anti-hepatotoxic, anti-inflammtory, anti-hyperlipidemic, antibacterial, antioxidant, and antiulcer capabilities. Alkaloids, flavonoids, glycosides, phenolics, phytobannins, quinones, saponins, tannins, and terpenoids are examples of phytoconstituents that have been claimed to have medicinal characteristics. Method: In the current study, a molecular docking technique was used to try and identify mTORC1protein inhibitors. A grid-based docking strategy was used to determine the binding using the Auto Dock software. Merck Molecular Force Field was used to build the 2D structures of compounds, convert them to 3D, and then energetically reduce them up to arms gradient of 0.01. (MMFF). Result: The molecular docking of Ferulic acid & Gallic acid with mTORC1 protein showed binding energy (Kcal/mol) -5.37 & -4.56 respectively. Conclusion: Theoretically, all the ligand molecules have shown encouraging docking score. The docking result of ferulic acid revealed that their docking scores was -5.37 kcal mol–1, and it can be predicted as good inhibitor of mTORC1 protein and thereby prevents dysregulation of intracellular protein synthesis and the metabolic balance along with decreasing oxidative stress on the kidney.","PeriodicalId":244854,"journal":{"name":"Scholars International Journal of Traditional and Complementary Medicine","volume":"202 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-02-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Molecular Docking Based Predictive Study of Bougainvillea Glabra against Mtorc1 Protein for the Treatment of Diabetic Nephropathy: Network Pharmacology\",\"authors\":\"Vijay Bahadur, J. Malik, G. Kumar, Sunil Kumar, Gyan Singh, V. 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引用次数: 0
摘要
背景:长期患病的 1 型和 2 型糖尿病患者的肾功能下降被称为糖尿病肾病 (DN) 或糖尿病肾脏病。据了解,该病的发展分为几个阶段,与血压和血糖管理有关。然而,尽管对血糖进行了严格管理,糖尿病患者慢性肾病(CKD)的发病率在过去 20 年中并未降低,这导致人们发现了导致该疾病发展的新风险因素。九重葛(Bougainvillea spectabilis)纸花的医学特性包括抗炎、抗肝毒性、抗炎、抗高血脂、抗菌、抗氧化和抗溃疡能力。生物碱、黄酮类、苷类、酚类、植物丹宁酸、醌类、皂苷、丹宁酸和萜类化合物是声称具有药用特性的植物成分的例子。研究方法本研究采用分子对接技术,试图找出 mTORC1 蛋白抑制剂。采用基于网格的对接策略,使用 Auto Dock 软件确定结合情况。默克分子力场(Merck Molecular Force Field)用于构建化合物的二维结构,将其转换为三维结构,然后将其能量梯度降低到 0.01。(MMFF)。结果阿魏酸和没食子酸与 mTORC1 蛋白的分子对接显示结合能(Kcal/mol)分别为-5.37 和-4.56。结论从理论上讲,所有配体分子都显示出令人鼓舞的对接得分。阿魏酸的对接结果表明,其对接得分为-5.37 kcal mol-1,可以预测它是 mTORC1 蛋白的良好抑制剂,从而防止细胞内蛋白质合成和代谢平衡失调,并减少对肾脏的氧化应激。
Molecular Docking Based Predictive Study of Bougainvillea Glabra against Mtorc1 Protein for the Treatment of Diabetic Nephropathy: Network Pharmacology
Background: The decline in kidney function experienced by people with type 1 and type 2 diabetes who are chronically ill is known as diabetic nephropathy (DN) or diabetic kidney disease. The condition is known to progress in a number of stages and is related to blood pressure and glycemic management. Nevertheless, despite strict blood sugar management, the prevalence of chronic kidney disease (CKD) in diabetic patients has not decreased over the past 20 years, which has led to the discovery of new risk factors for the illness's development. The medical characteristics of the Paper Flower, Bougainvillea spectabilis, include anti-inflammatory, anti-hepatotoxic, anti-inflammtory, anti-hyperlipidemic, antibacterial, antioxidant, and antiulcer capabilities. Alkaloids, flavonoids, glycosides, phenolics, phytobannins, quinones, saponins, tannins, and terpenoids are examples of phytoconstituents that have been claimed to have medicinal characteristics. Method: In the current study, a molecular docking technique was used to try and identify mTORC1protein inhibitors. A grid-based docking strategy was used to determine the binding using the Auto Dock software. Merck Molecular Force Field was used to build the 2D structures of compounds, convert them to 3D, and then energetically reduce them up to arms gradient of 0.01. (MMFF). Result: The molecular docking of Ferulic acid & Gallic acid with mTORC1 protein showed binding energy (Kcal/mol) -5.37 & -4.56 respectively. Conclusion: Theoretically, all the ligand molecules have shown encouraging docking score. The docking result of ferulic acid revealed that their docking scores was -5.37 kcal mol–1, and it can be predicted as good inhibitor of mTORC1 protein and thereby prevents dysregulation of intracellular protein synthesis and the metabolic balance along with decreasing oxidative stress on the kidney.