{"title":"预测乳腺癌预后的多胺代谢相关基因新特征","authors":"Ruiqi Liu, Xiaoqian Huang, Xiaozhou Chen","doi":"10.54097/3rt49z65","DOIUrl":null,"url":null,"abstract":"Polyamine metabolism is involved in several cellular processes in organisms and is closely associated with tumorigenesis, progression, and metastasis. In this study, using breast cancer data from The Cancer Genome Atlas (TCGA) database as well as polyamine metabolism-related genes obtained from previous studies, key genes were screened using LASSO regression, and a prognostic label was created, which was validated using an independent cohort, Metabric. The breast cancer cohort of this prognostic label TCGA was divided into high-risk and low-risk groups, and the prognosis of high-risk and low-risk groups was significantly different. The biological indicators of high-risk and low-risk groups were significantly different, and the prediction results of this model were validated in the Metabric cohort. Our model can effectively predict the prognosis of breast cancer patients based on the characteristics of polyamine metabolism-related genes, which are also related to immune cell infiltration and immunotherapy response, and have some potential for clinical application.","PeriodicalId":182292,"journal":{"name":"International Journal of Biology and Life Sciences","volume":"84 6","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2024-02-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A New Polyamine Metabolism-related Gene Signature Predicts Breast Cancer Prognosis\",\"authors\":\"Ruiqi Liu, Xiaoqian Huang, Xiaozhou Chen\",\"doi\":\"10.54097/3rt49z65\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Polyamine metabolism is involved in several cellular processes in organisms and is closely associated with tumorigenesis, progression, and metastasis. In this study, using breast cancer data from The Cancer Genome Atlas (TCGA) database as well as polyamine metabolism-related genes obtained from previous studies, key genes were screened using LASSO regression, and a prognostic label was created, which was validated using an independent cohort, Metabric. The breast cancer cohort of this prognostic label TCGA was divided into high-risk and low-risk groups, and the prognosis of high-risk and low-risk groups was significantly different. The biological indicators of high-risk and low-risk groups were significantly different, and the prediction results of this model were validated in the Metabric cohort. Our model can effectively predict the prognosis of breast cancer patients based on the characteristics of polyamine metabolism-related genes, which are also related to immune cell infiltration and immunotherapy response, and have some potential for clinical application.\",\"PeriodicalId\":182292,\"journal\":{\"name\":\"International Journal of Biology and Life Sciences\",\"volume\":\"84 6\",\"pages\":\"\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-02-22\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Biology and Life Sciences\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.54097/3rt49z65\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Biology and Life Sciences","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.54097/3rt49z65","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
摘要
多胺代谢参与生物体的多个细胞过程,与肿瘤的发生、发展和转移密切相关。本研究利用癌症基因组图谱(The Cancer Genome Atlas,TCGA)数据库中的乳腺癌数据以及以往研究中获得的多胺代谢相关基因,采用LASSO回归法筛选关键基因,并创建了一个预后标签,该标签通过独立队列Metabric进行了验证。该预后标签TCGA的乳腺癌队列分为高危组和低危组,高危组和低危组的预后有显著差异。高危组和低危组的生物学指标存在显著差异,该模型的预测结果在Metabric队列中得到了验证。我们的模型可以根据多胺代谢相关基因的特点有效预测乳腺癌患者的预后,而多胺代谢相关基因还与免疫细胞浸润和免疫治疗反应有关,具有一定的临床应用潜力。
A New Polyamine Metabolism-related Gene Signature Predicts Breast Cancer Prognosis
Polyamine metabolism is involved in several cellular processes in organisms and is closely associated with tumorigenesis, progression, and metastasis. In this study, using breast cancer data from The Cancer Genome Atlas (TCGA) database as well as polyamine metabolism-related genes obtained from previous studies, key genes were screened using LASSO regression, and a prognostic label was created, which was validated using an independent cohort, Metabric. The breast cancer cohort of this prognostic label TCGA was divided into high-risk and low-risk groups, and the prognosis of high-risk and low-risk groups was significantly different. The biological indicators of high-risk and low-risk groups were significantly different, and the prediction results of this model were validated in the Metabric cohort. Our model can effectively predict the prognosis of breast cancer patients based on the characteristics of polyamine metabolism-related genes, which are also related to immune cell infiltration and immunotherapy response, and have some potential for clinical application.