Christina R. Ferreira, Paulo Clairmont F. de Lima Gomes, Kiley Marie Robison‡, Bruce R. Cooper‡ and Jonathan H. Shannahan
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引用次数: 0
摘要
Omics 分析统指对基因变异、RNA、表观遗传标记、蛋白质、脂类和代谢物进行分析的可能性。检测生物流体中与新陈代谢有关的分子最常用的分析方法是振动光谱技术,如红外光谱、拉曼光谱、核磁共振(NMR)光谱和质谱分析(MS)。利用质谱进行的基于全局的评估正在迅速扩展,并被应用到各个科学学科和临床环境中。不过,微型便携式全息图像分析仪的开发使用户可以更方便地在现场应用该技术。从全息方法中获得的分子信息的变化有助于评估环境暴露后的人体健康状况以及多种疾病的发生和发展。随着 MS 技术的发展,用于检测与健康状况变化相关的个性化代谢分子偏差的统计和机器学习方法也在发展。这些进步共同为基于 omics 技术的护理点精准医疗方法带来了机遇。这篇综述系统地评估了利用全息方法从可随时获取的生物流体以及与受暴露和疾病影响的小分子相关的现有数据库中获取的化学信息。这包括介绍基于质谱的全息技术、当前最先进的能力以及它们在调查分子信息方面各自的优势和局限性。此外,我们还介绍了如何将从这些评估中获得的知识应用于个性化医疗和诊断策略。
Implementation of multiomic mass spectrometry approaches for the evaluation of human health following environmental exposure
Omics analyses collectively refer to the possibility of profiling genetic variants, RNA, epigenetic markers, proteins, lipids, and metabolites. The most common analytical approaches used for detecting molecules present within biofluids related to metabolism are vibrational spectroscopy techniques, represented by infrared, Raman, and nuclear magnetic resonance (NMR) spectroscopies and mass spectrometry (MS). Omics-based assessments utilizing MS are rapidly expanding and being applied to various scientific disciplines and clinical settings. Most of the omics instruments are operated by specialists in dedicated laboratories; however, the development of miniature portable omics has made the technology more available to users for field applications. Variations in molecular information gained from omics approaches are useful for evaluating human health following environmental exposure and the development and progression of numerous diseases. As MS technology develops so do statistical and machine learning methods for the detection of molecular deviations from personalized metabolism, which are correlated to altered health conditions, and they are intended to provide a multi-disciplinary overview for researchers interested in adding multiomic analysis to their current efforts. This includes an introduction to mass spectrometry-based omics technologies, current state-of-the-art capabilities and their respective strengths and limitations for surveying molecular information. Furthermore, we describe how knowledge gained from these assessments can be applied to personalized medicine and diagnostic strategies.