Mahmoud A. Elfaky , Hassan M. Okairy , Hossam M. Abdallah , Abdulrahman E. Koshak , Gamal A. Mohamed , Sabrin R.M. Ibrahim , Abdulrahim A. Alzain , Wael A.H. Hegazy , El-Sayed Khafagy , Noura M. Seleem
{"title":"评估 6-姜酚的抗菌潜力:实验与计算相结合的方法","authors":"Mahmoud A. Elfaky , Hassan M. Okairy , Hossam M. Abdallah , Abdulrahman E. Koshak , Gamal A. Mohamed , Sabrin R.M. Ibrahim , Abdulrahim A. Alzain , Wael A.H. Hegazy , El-Sayed Khafagy , Noura M. Seleem","doi":"10.1016/j.jsps.2024.102041","DOIUrl":null,"url":null,"abstract":"<div><p>The rise of antibiotic resistance in bacteria is becoming a global concern, particularly due to the dwindling supply of new antibiotics. This situation mandates the discovery of new antimicrobial candidates. Plant-derived natural compounds have historically played a crucial role in the development of antibiotics, serving as a rich source of substances possessing antimicrobial properties. Numerous studies have supported the reputation of 6-gingerol, a prominent compound found in the ginger family, for its antibacterial properties. In this study, the antibacterial activities of 6-gingerol were evaluated against Gram-negative bacteria, <em>Acinetobacter baumannii</em> and <em>Klebsiella pneumoniae</em>, with a particular focus on the clinically significant Gram-negative <em>Pseudomonas aeruginosa</em> and Gram-positive bacteria <em>Staphylococcus aureus</em>. Furthermore, the anti-virulence activities were assessed <em>in vitro</em>, <em>in vivo</em>, and <em>in silico</em>. The current findings showed that 6-gingerol’s antibacterial activity is due to its significant effect on the disruption of the bacterial cell membrane and efflux pumps, as it significantly decreased the efflux and disrupted the cell membrane of <em>S. aureus</em> and <em>P. aeruginosa</em>. Furthermore, 6-gingerol significantly decreased the biofilm formation and production of virulence factors in <em>S. aureus</em> and <em>P. aeruginosa</em> in concentrations below MICs. The anti-virulence properties of 6-gingerol could be attributed to its capacity to disrupt bacterial virulence-regulating systems; quorum sensing (QS). 6-Gingerol was found to interact with QS receptors and downregulate the genes responsible for QS. In addition, molecular docking, and molecular dynamics (MD) simulation results indicated that 6-gingerol showed a comparable binding affinity to the co-crystalized ligands of different <em>P. aeruginosa</em> QS targets as well as stable interactions during 100 ns MD simulations. These findings suggest that 6-gingerol holds promise as an anti-virulence agent that can be combined with antibiotics for the treatment of severe infections.</p></div>","PeriodicalId":49257,"journal":{"name":"Saudi Pharmaceutical Journal","volume":null,"pages":null},"PeriodicalIF":3.0000,"publicationDate":"2024-03-18","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.sciencedirect.com/science/article/pii/S1319016424000914/pdfft?md5=db3fa4efd33050aaef867023a17d9f36&pid=1-s2.0-S1319016424000914-main.pdf","citationCount":"0","resultStr":"{\"title\":\"Assessing the antibacterial potential of 6-gingerol: Combined experimental and computational approaches\",\"authors\":\"Mahmoud A. Elfaky , Hassan M. Okairy , Hossam M. Abdallah , Abdulrahman E. Koshak , Gamal A. Mohamed , Sabrin R.M. Ibrahim , Abdulrahim A. Alzain , Wael A.H. Hegazy , El-Sayed Khafagy , Noura M. Seleem\",\"doi\":\"10.1016/j.jsps.2024.102041\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The rise of antibiotic resistance in bacteria is becoming a global concern, particularly due to the dwindling supply of new antibiotics. This situation mandates the discovery of new antimicrobial candidates. Plant-derived natural compounds have historically played a crucial role in the development of antibiotics, serving as a rich source of substances possessing antimicrobial properties. Numerous studies have supported the reputation of 6-gingerol, a prominent compound found in the ginger family, for its antibacterial properties. In this study, the antibacterial activities of 6-gingerol were evaluated against Gram-negative bacteria, <em>Acinetobacter baumannii</em> and <em>Klebsiella pneumoniae</em>, with a particular focus on the clinically significant Gram-negative <em>Pseudomonas aeruginosa</em> and Gram-positive bacteria <em>Staphylococcus aureus</em>. Furthermore, the anti-virulence activities were assessed <em>in vitro</em>, <em>in vivo</em>, and <em>in silico</em>. The current findings showed that 6-gingerol’s antibacterial activity is due to its significant effect on the disruption of the bacterial cell membrane and efflux pumps, as it significantly decreased the efflux and disrupted the cell membrane of <em>S. aureus</em> and <em>P. aeruginosa</em>. Furthermore, 6-gingerol significantly decreased the biofilm formation and production of virulence factors in <em>S. aureus</em> and <em>P. aeruginosa</em> in concentrations below MICs. The anti-virulence properties of 6-gingerol could be attributed to its capacity to disrupt bacterial virulence-regulating systems; quorum sensing (QS). 6-Gingerol was found to interact with QS receptors and downregulate the genes responsible for QS. In addition, molecular docking, and molecular dynamics (MD) simulation results indicated that 6-gingerol showed a comparable binding affinity to the co-crystalized ligands of different <em>P. aeruginosa</em> QS targets as well as stable interactions during 100 ns MD simulations. These findings suggest that 6-gingerol holds promise as an anti-virulence agent that can be combined with antibiotics for the treatment of severe infections.</p></div>\",\"PeriodicalId\":49257,\"journal\":{\"name\":\"Saudi Pharmaceutical Journal\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":3.0000,\"publicationDate\":\"2024-03-18\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.sciencedirect.com/science/article/pii/S1319016424000914/pdfft?md5=db3fa4efd33050aaef867023a17d9f36&pid=1-s2.0-S1319016424000914-main.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Saudi Pharmaceutical Journal\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1319016424000914\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"PHARMACOLOGY & PHARMACY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Saudi Pharmaceutical Journal","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1319016424000914","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PHARMACOLOGY & PHARMACY","Score":null,"Total":0}
Assessing the antibacterial potential of 6-gingerol: Combined experimental and computational approaches
The rise of antibiotic resistance in bacteria is becoming a global concern, particularly due to the dwindling supply of new antibiotics. This situation mandates the discovery of new antimicrobial candidates. Plant-derived natural compounds have historically played a crucial role in the development of antibiotics, serving as a rich source of substances possessing antimicrobial properties. Numerous studies have supported the reputation of 6-gingerol, a prominent compound found in the ginger family, for its antibacterial properties. In this study, the antibacterial activities of 6-gingerol were evaluated against Gram-negative bacteria, Acinetobacter baumannii and Klebsiella pneumoniae, with a particular focus on the clinically significant Gram-negative Pseudomonas aeruginosa and Gram-positive bacteria Staphylococcus aureus. Furthermore, the anti-virulence activities were assessed in vitro, in vivo, and in silico. The current findings showed that 6-gingerol’s antibacterial activity is due to its significant effect on the disruption of the bacterial cell membrane and efflux pumps, as it significantly decreased the efflux and disrupted the cell membrane of S. aureus and P. aeruginosa. Furthermore, 6-gingerol significantly decreased the biofilm formation and production of virulence factors in S. aureus and P. aeruginosa in concentrations below MICs. The anti-virulence properties of 6-gingerol could be attributed to its capacity to disrupt bacterial virulence-regulating systems; quorum sensing (QS). 6-Gingerol was found to interact with QS receptors and downregulate the genes responsible for QS. In addition, molecular docking, and molecular dynamics (MD) simulation results indicated that 6-gingerol showed a comparable binding affinity to the co-crystalized ligands of different P. aeruginosa QS targets as well as stable interactions during 100 ns MD simulations. These findings suggest that 6-gingerol holds promise as an anti-virulence agent that can be combined with antibiotics for the treatment of severe infections.
期刊介绍:
The Saudi Pharmaceutical Journal (SPJ) is the official journal of the Saudi Pharmaceutical Society (SPS) publishing high quality clinically oriented submissions which encompass the various disciplines of pharmaceutical sciences and related subjects. SPJ publishes 8 issues per year by the Saudi Pharmaceutical Society, with the cooperation of the College of Pharmacy, King Saud University.