Wilson Thau Lym Yong , Anis Adilah Mustafa, Mohammad Rahmat Derise, Kenneth Francis Rodrigues
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引用次数: 0
摘要
在马来西亚沙巴州,竹子在维持生态多样性和推动社会经济发展方面发挥着举足轻重的作用。然而,由于不同竹种之间的性状存在重叠,仅根据形态特征来识别竹种构成了挑战。DNA 条形码是一种非常有效的方法,在识别不同类群和生态系统中的不同植物物种方面具有潜在的准确性。在这项研究中,我们使用叶绿体 matK 和 rbcL 区域作为条形码标记来鉴定沙巴州的 15 种竹子植物。matK 和 rbcL 在属一级的准确率高达 100%,这表明它们在 BLAST 搜索和遗传距离分析中捕捉更广泛分类类别的可靠性。然而,在种的水平上,成功率仅限于 60%,这揭示了利用现有 DNA 条形码区分近缘竹种的挑战。我们的研究结果表明,需要一个物种覆盖面广的先进 DNA 条形码参考文献库来进行准确的物种鉴定。这项研究不仅揭示了沙巴州竹子多样性和分类学的重要见解,还有助于正在进行的竹子资源保护,并支持该地区的可持续资源管理。
DNA barcoding using chloroplast matK and rbcL regions for the identification of bamboo species in Sabah
Bamboo species play pivotal roles in maintaining ecological diversity and driving socio-economic development in Sabah, Malaysia. However, due to overlapping traits among distinct bamboo species, identifying them based solely on morphological characteristics poses challenges. DNA barcoding emerges as a highly effective method, demonstrating potential accuracy in identifying diverse plant species across various taxa and ecosystems. In this study, we used the chloroplast matK and rbcL regions as barcode markers to identify 15 bamboo plants in Sabah. Both matK and rbcL exhibited a notable 100% accuracy at the genus level, indicating their reliability in capturing broader taxonomic categories during BLAST searches and genetic distance analysis. However, at the species level, the success rate was limited to 60%, revealing challenges in differentiating closely related bamboo species using the existing DNA barcodes. Our findings underscore the need for an advanced DNA barcode reference library with extensive species coverage for accurate species identification. This study not only unveiled crucial insights into bamboo diversity and taxonomy in Sabah but also contributes to ongoing bamboo resource conservation and supports sustainable resource management in the region.